RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 K7ESF4 209 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 HYAL3O43820 417 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-217ENST00000548420 FSHRP23945 695 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 GNA11P29992 359 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 NEK4P51957 841 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 PFKPQ01813 784 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 STK3Q13188 491 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 SH3PXD2AQ5TCZ1 1133 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 LARP1BQ659C4 914 aaKnown RBP15.74■□□□□ 0.11
PTCH1-217ENST00000548420 TCEAL6Q6IPX3 200 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 KIAA1211LQ6NV74 962 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 TCEAL3Q969E4 200 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 CDHR1Q96JP9 859 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 PRKD2Q9BZL6 878 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 PLA2G2FQ9BZM2 168 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 KLK13Q9UKR3 277 aa15.74■□□□□ 0.11
PTCH1-217ENST00000548420 ZFP37Q9Y6Q3 630 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-217ENST00000548420 NOTCH4Q99466 2003 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 MEIS3P2A8K0S8 358 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 CPLX1O14810 134 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 DEXIO95424 95 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 GLUD1P00367 558 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 VTNP04004 478 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 PRB1P04280 392 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 CYP3A4P08684 503 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 CNR2P34972 360 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 CCR3P51677 355 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 RNF43Q68DV7 783 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 HEATR6Q6AI08 1181 aaKnown RBP15.73■□□□□ 0.11
PTCH1-217ENST00000548420 CPLX2Q6PUV4 134 aaKnown RBP15.73■□□□□ 0.11
PTCH1-217ENST00000548420 ZNF280BQ86YH2 543 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 TRIM22Q8IYM9 498 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 LPPQ93052 612 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 RPS6KC1Q96S38 1066 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 MXRA8Q9BRK3 442 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 SLKQ9H2G2 1235 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-217ENST00000548420 MRPL17Q9NRX2 175 aaKnown RBP15.73■□□□□ 0.11
PTCH1-217ENST00000548420 C2orf42Q9NWW7 574 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 NEUROG3Q9Y4Z2 214 aa15.73■□□□□ 0.11
PTCH1-217ENST00000548420 KALRNO60229 2985 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 ZBTB42B2RXF5 422 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 MEIS1O00470 390 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 EPN2O95208 641 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 CTDNEP1O95476 244 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 CXCL12P48061 93 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 ME3Q16798 604 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 LONRF3Q496Y0 759 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 CEP55Q53EZ4 464 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 POTEHQ6S545 545 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 NIPA1Q7RTP0 329 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 LONP2Q86WA8 852 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 GLIS3Q8NEA6 775 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 CCDC148Q8NFR7 591 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 FGF13Q92913 245 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 LMAN1LQ9HAT1 526 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 VPS54Q9P1Q0 977 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 MSRB2Q9Y3D2 182 aa15.72■□□□□ 0.11
PTCH1-217ENST00000548420 STK36Q9NRP7 1315 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 C4orf47A7E2U8 309 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 M0R2N6 131 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 EDIL3O43854 480 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-217ENST00000548420 MTMR1Q13613 665 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 PPP2R5DQ14738 602 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 NPY5RQ15761 445 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 JAKMIP3Q5VZ66 844 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 CEP68Q76N32 757 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 PLPPR4Q7Z2D5 763 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 GRASPQ7Z6J2 395 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-217ENST00000548420 REXO1Q8N1G1 1221 aaKnown RBP15.71■□□□□ 0.11
PTCH1-217ENST00000548420 ITFG1Q8TB96 612 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 GBP3Q9H0R5 595 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 ADAMTS10Q9H324 1103 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 KCNH7Q9NS40 1196 aa15.71■□□□□ 0.11
PTCH1-217ENST00000548420 MRPS17Q9Y2R5 130 aaKnown RBP15.71■□□□□ 0.11
PTCH1-217ENST00000548420 CACNA1EQ15878 2313 aa15.71■□□□□ 0.1
PTCH1-217ENST00000548420 C1QL1O75973 258 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 CDKL5O76039 1030 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 DDHD2O94830 711 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 LARGE1O95461 756 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 ADH1AP07327 375 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 FGFR4P22455 802 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 CIITAP33076 1130 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 RAP1GAPP47736 663 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 STAT5BP51692 787 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 MTSS1LQ765P7 747 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 PALB2Q86YC2 1186 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 DAGLBQ8NCG7 672 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 HDAC7Q8WUI4 952 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 ZNF668Q96K58 619 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-217ENST00000548420 AIFM3Q96NN9 605 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 C22orf23Q9BZE7 217 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 AZI2Q9H6S1 392 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 RXFP1Q9HBX9 757 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms