RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 BMS1Q14692 1282 aaKnown RBP14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CBWD6Q4V339 395 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 EPC2Q52LR7 807 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CBWD3Q5JTY5 395 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CBWD5Q5RIA9 395 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 SLC39A4Q6P5W5 647 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 MTHFD1LQ6UB35 978 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 TSHZ1Q6ZSZ6 1077 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 TAS1R3Q7RTX0 852 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 SRGAP1Q7Z6B7 1085 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 ZNF410Q86VK4 478 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CBWD2Q8IUF1 395 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CCDC127Q96BQ5 260 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 SAAL1Q96ER3 474 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 NT5C1BQ96P26 610 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 ACO2Q99798 780 aaKnown RBP14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CCDC113Q9H0I3 377 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 IKZF4Q9H2S9 585 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 FZD8Q9H461 694 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 SIX2Q9NPC8 291 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 INTUQ9ULD6 942 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 GNEQ9Y223 722 aaKnown RBP14.56□□□□□ -0.08
PTCH1-215ENST00000547672 DYNC1I1O14576 645 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 MSCO60682 206 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 TACC1O75410 805 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 ZNF865P0CJ78 1059 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 ACTN1P12814 892 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 AKR1A1P14550 325 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 TNNI1P19237 187 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 GTF2F1P35269 517 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 GCLMP48507 274 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 MCL1Q07820 350 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 DRAP1Q14919 205 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 GRIK4Q16099 956 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 ASTE1Q2TB18 679 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 ZNF569Q5MCW4 686 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 HGSNATQ68CP4 663 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 IQCEQ6IPM2 695 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 DPY19L2P1Q6NXN4 242 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 MPZL3Q6UWV2 235 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 IRF2BP2Q7Z5L9 587 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 TLK2Q86UE8 772 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 ACRBPQ8NEB7 543 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 ALS2CR12Q96Q35 445 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 TARS2Q9BW92 718 aaKnown RBP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 UBE2TQ9NPD8 197 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 RAB20Q9NX57 234 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 RBAKQ9NYW8 714 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-215ENST00000547672 AKT3Q9Y243 479 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 TNFSF13BQ9Y275 285 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 FHOD1Q9Y613 1164 aa14.55□□□□□ -0.08
PTCH1-215ENST00000547672 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-215ENST00000547672 TISP43B9A030 160 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 INO80B-WBP1J3KQ70 363 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 KIF3CO14782 793 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 PJA2O43164 708 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 DUSP11O75319 330 aaKnown RBP14.54□□□□□ -0.08
PTCH1-215ENST00000547672 URI1O94763 535 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-215ENST00000547672 IL18RAPO95256 599 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 BPIFB4P59827 614 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 IGBP1P78318 339 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 PPP3CAQ08209 521 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-215ENST00000547672 DEFB115Q30KQ5 88 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 ATF7IP2Q5U623 682 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 NME8Q8N427 588 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 LRRC71Q8N4P6 559 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 TRIM58Q8NG06 486 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 LMO3Q8TAP4 145 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 LMBR1Q8WVP7 490 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 NLRP4Q96MN2 994 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 IMPG2Q9BZV3 1241 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 GUCA1BQ9UMX6 200 aa14.54□□□□□ -0.08
PTCH1-215ENST00000547672 LRRIQ3A6PVS8 624 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 BTNL10A8MVZ5 291 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 F8VZ95 297 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 RIOK3O14730 519 aaKnown RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 SLU7O95391 586 aaKnown RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 F2P00734 622 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 GNRH1P01148 92 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 ADRB2P07550 413 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 DLATP10515 647 aaKnown RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 MCF2P10911 925 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 TNFAIP3P21580 790 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 PSMC4P43686 418 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 DLG4P78352 724 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 MAP2K1Q02750 393 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 ARID5AQ03989 594 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 NAB2Q15742 525 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 SV2AQ7L0J3 742 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 WDR49Q8IV35 697 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 LINC01465Q8N7H1 131 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 SECISBP2LQ93073 1101 aaKnown RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 SCLT1Q96NL6 688 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 CGRRF1Q99675 332 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 NAPGQ99747 312 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 ADPGKQ9BRR6 497 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms