RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GAD1Q99259 594 aa13.06□□□□□ -0.32
YBX3-217ENST00000546164 ADPGKQ9BRR6 497 aa13.06□□□□□ -0.32
YBX3-217ENST00000546164 MRPL4Q9BYD3 311 aaKnown RBP13.06□□□□□ -0.32
YBX3-217ENST00000546164 UBE2ZQ9H832 354 aaPredicted RBP13.06□□□□□ -0.32
YBX3-217ENST00000546164 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
YBX3-217ENST00000546164 TFIP11Q9UBB9 837 aaKnown RBP13.06□□□□□ -0.32
YBX3-217ENST00000546164 NPHP3-ACAD11A0A0J9YXS1 232 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 H0YCG3 227 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 SLC16A4O15374 487 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 DDHD2O94830 711 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 MAPTP10636 758 aaKnown RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 LIG1P18858 919 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 PROZP22891 400 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 SLC11A1P49279 550 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 ERVFC1P60507 584 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 DSC1Q08554 894 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 HYAL1Q12794 435 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 GIT2Q14161 759 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 CTC1Q2NKJ3 1217 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 RRAGBQ5VZM2 374 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 TMEM173Q86WV6 379 aaPredicted RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 TMEM169Q96HH4 297 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 IGSF21Q96ID5 467 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 PARVGQ9HBI0 331 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
YBX3-217ENST00000546164 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 STK39Q9UEW8 545 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 CFAP45Q9UL16 551 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
YBX3-217ENST00000546164 FSD2A1L4K1 749 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 ABLIM1O14639 778 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 CUTAO60888 179 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 FAM13AO94988 1023 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 POMCP01189 267 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 AKAP5P24588 427 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 SCNN1GP51170 649 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 TFF2Q03403 129 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 GRIK3Q13003 919 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 BECN1Q14457 450 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
YBX3-217ENST00000546164 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
YBX3-217ENST00000546164 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 FIZ1Q96SL8 496 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
YBX3-217ENST00000546164 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 MIOSQ9NXC5 875 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 ZDHHC9Q9Y397 364 aa13.04□□□□□ -0.32
YBX3-217ENST00000546164 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 A0A087X0B3 334 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 TRAK2O60296 914 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 TBCAO75347 108 aaKnown RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 RECQL4O94761 1208 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 ALDH2P05091 517 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 MCF2P10911 925 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 ABCD1P33897 745 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 DNM1Q05193 864 aaKnown RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 STRN3Q13033 797 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 LEXMQ3ZCV2 418 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 SV2BQ7L1I2 683 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 ADGRD2Q7Z7M1 963 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 DDX53Q86TM3 631 aaKnown RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 BCL7CQ8WUZ0 217 aaPredicted RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
YBX3-217ENST00000546164 TCF25Q9BQ70 676 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 CDT1Q9H211 546 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 ST6GALNAC4Q9H4F1 302 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 PARP2Q9UGN5 583 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 RCOR1Q9UKL0 485 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 PCDHGC5Q9Y5F6 944 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 IRAK3Q9Y616 596 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 PLXNA4Q9HCM2 1894 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 ATG2AQ2TAZ0 1938 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 BDP1A6H8Y1 2624 aa13.03□□□□□ -0.32
YBX3-217ENST00000546164 PTGESO14684 152 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 NRP1O14786 923 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 TOM1L1O75674 476 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 EFEMP2O95967 443 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 PIGRP01833 764 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 BMP1P13497 986 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 KCNA5P22460 613 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 LTBRP36941 435 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 GRM5P41594 1212 aa13.02□□□□□ -0.33
YBX3-217ENST00000546164 STAT6P42226 847 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms