RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 LRRC43Q8N309 656 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 PNMA1Q8ND90 353 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 PPP2R3CQ969Q6 453 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 PNMA5Q96PV4 448 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 RIOK1Q9BRS2 568 aaKnown RBP11.04□□□□□ -0.64
TCF4-209ENST00000544241 WNT8AQ9H1J5 351 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 ARPP21Q9UBL0 812 aaPredicted RBP11.04□□□□□ -0.64
TCF4-209ENST00000544241 ZNF510Q9Y2H8 683 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 SMAPO00193 183 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 SLC26A4O43511 780 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
TCF4-209ENST00000544241 CBX6O95503 412 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 ASMTLO95671 621 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 ACTN1P12814 892 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 COPB2P35606 906 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 SCNN1BP51168 640 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 DNAJC3Q13217 504 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.64
TCF4-209ENST00000544241 ZNF211Q13398 564 aaPredicted RBP11.04□□□□□ -0.64
TCF4-209ENST00000544241 TMED1Q13445 227 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 TMEM119Q4V9L6 283 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 C12orf50Q8NA57 414 aaPredicted RBP11.04□□□□□ -0.64
TCF4-209ENST00000544241 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
TCF4-209ENST00000544241 GRK7Q8WTQ7 553 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 ZNF653Q96CK0 615 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 SNF8Q96H20 258 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 TTC25Q96NG3 672 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 CATSPER2Q96P56 530 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 KCTD10Q9H3F6 313 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 PPCSQ9HAB8 311 aa11.04□□□□□ -0.64
TCF4-209ENST00000544241 BTBD19C9JJ37 291 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 USP17L21D6R901 530 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 TBX10O75333 385 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 ASLP04424 464 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 CREB1P16220 341 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 MPP2Q14168 576 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
TCF4-209ENST00000544241 NLRP9Q7RTR0 991 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 CLNKQ7Z7G1 428 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 NLRP10Q86W26 655 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 C10orf82Q8WW14 230 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 DNAJC19Q96DA6 116 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 EPB41L1Q9H4G0 881 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 ITGB1BP2Q9UKP3 347 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 PAIP2BQ9ULR5 123 aaKnown RBP11.03□□□□□ -0.64
TCF4-209ENST00000544241 NAALADL1Q9UQQ1 740 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
TCF4-209ENST00000544241 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
TCF4-209ENST00000544241 ALG6Q9Y672 507 aa11.03□□□□□ -0.64
TCF4-209ENST00000544241 SMCO2A6NFE2 343 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.64
TCF4-209ENST00000544241 GSC2O15499 205 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 ATP9BO43861 1147 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 UBTFL6P0CB48 400 aaPredicted RBP11.02□□□□□ -0.64
TCF4-209ENST00000544241 ABCB4P21439 1286 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 YY1P25490 414 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 FOXN2P32314 431 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 SOX5P35711 763 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 AP2B1P63010 937 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 TCEAL1Q15170 157 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 ACSBG2Q5FVE4 666 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 HERC4Q5GLZ8 1057 aaPredicted RBP11.02□□□□□ -0.64
TCF4-209ENST00000544241 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 SCYL3Q8IZE3 742 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 REXO1Q8N1G1 1221 aaKnown RBP11.02□□□□□ -0.64
TCF4-209ENST00000544241 TBCKQ8TEA7 893 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 ALG3Q92685 438 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 HAUS1Q96CS2 278 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 SMC6Q96SB8 1091 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 CADM1Q9BY67 442 aaKnown RBP11.02□□□□□ -0.64
TCF4-209ENST00000544241 FOXP3Q9BZS1 431 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 LRRC19Q9H756 370 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 GCNT4Q9P109 453 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 ASIC3Q9UHC3 531 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.64
TCF4-209ENST00000544241 TRAF3IP3Q9Y228 551 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 ROBO3Q96MS0 1386 aa11.02□□□□□ -0.64
TCF4-209ENST00000544241 ALS2Q96Q42 1657 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 KRT36O76013 467 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 HAUS5O94927 633 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 TNFAIP3P21580 790 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 KYNUQ16719 465 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 Q4G0T1 1027 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 HSP90AA5PQ58FG0 334 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 SPATA24Q86W54 205 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 RELL1Q8IUW5 271 aa11.02□□□□□ -0.65
TCF4-209ENST00000544241 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.65
TCF4-209ENST00000544241 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
TCF4-209ENST00000544241 HELBQ8NG08 1087 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms