RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
VPS33A-208ENST00000543633 ACCSQ96QU6 501 aa14.74□□□□□ -0.05
VPS33A-208ENST00000543633 RIT2Q99578 217 aa14.74□□□□□ -0.05
VPS33A-208ENST00000543633 TIPINQ9BVW5 301 aa14.74□□□□□ -0.05
VPS33A-208ENST00000543633 IKZF4Q9H2S9 585 aa14.74□□□□□ -0.05
VPS33A-208ENST00000543633 ST6GALNAC4Q9H4F1 302 aa14.74□□□□□ -0.05
VPS33A-208ENST00000543633 LARSQ9P2J5 1176 aaKnown RBP14.74□□□□□ -0.05
VPS33A-208ENST00000543633 NOCTQ9UK39 431 aaKnown RBP14.74□□□□□ -0.05
VPS33A-208ENST00000543633 TLDC2A0PJX2 215 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 O00370 1275 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 HIP1RO75146 1068 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 TCEA3O75764 348 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 POLR2MP0CAP2 368 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 ELF1P32519 619 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 CAV1Q03135 178 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 CEP55Q53EZ4 464 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 SH3BP5LQ7L8J4 393 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 ARHGEF19Q8IW93 802 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 CCDC105Q8IYK2 499 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 SLC17A8Q8NDX2 589 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 A0A1B0GUA9 196 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 K7ENM7 598 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 KIF1CO43896 1103 aaKnown RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 SNX3O60493 162 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 ENTPD3O75355 529 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 ATP6V1G2O95670 118 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 VIL1P09327 827 aaKnown RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 MARCKSL1P49006 195 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 STAT2P52630 851 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 RWDD2BP57060 319 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 SNAP25P60880 206 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 IFI35P80217 286 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 MIGA2Q7L4E1 593 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 DAW1Q8N136 415 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 ZNF564Q8TBZ8 553 aaPredicted RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 EPS8L3Q8TE67 593 aaKnown RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 PRMT1Q99873 361 aaKnown RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 UNC45AQ9H3U1 944 aa14.73□□□□□ -0.05
VPS33A-208ENST00000543633 DBR1Q9UK59 544 aaKnown RBP14.73□□□□□ -0.05
VPS33A-208ENST00000543633 FSCN2O14926 492 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 CHRNB2P17787 502 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 ITIH2P19823 946 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 MESDQ14696 234 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 RBM26Q5T8P6 1007 aaKnown RBP14.72□□□□□ -0.05
VPS33A-208ENST00000543633 STYK1Q6J9G0 422 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 RHBDF2Q6PJF5 856 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 ZDHHC14Q8IZN3 488 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 GPATCH11Q8N954 259 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 SHC3Q92529 594 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 IWS1Q96ST2 819 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 LXNQ9BS40 222 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 DEFB129Q9H1M3 183 aa14.72□□□□□ -0.05
VPS33A-208ENST00000543633 MRPL11Q9Y3B7 192 aaKnown RBP14.72□□□□□ -0.05
VPS33A-208ENST00000543633 ZNFX1Q9P2E3 1918 aaKnown RBP14.72□□□□□ -0.05
VPS33A-208ENST00000543633 FAM196BA6NMK8 535 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 G3V3G9 751 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 H0YIN7 160 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 CHMP2AO43633 222 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 SPOPO43791 374 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PLA2G6O60733 806 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 VIMP08670 466 aaKnown RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PYGMP11217 842 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 FGFR4P22455 802 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 MXI1P50539 228 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 MFAP3P55082 362 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 LMNB2Q03252 620 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 ENPEPQ07075 957 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 RASA3Q14644 834 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 SHROOM1Q2M3G4 852 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 DCAF8Q5TAQ9 597 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 STRIP1Q5VSL9 837 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 RNF207Q6ZRF8 634 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 KSR1Q8IVT5 923 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 XXYLT1Q8NBI6 393 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 GRK7Q8WTQ7 553 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 ELAC2Q9BQ52 826 aaKnown RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 ZNF577Q9BSK1 485 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 USP15Q9Y4E8 981 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 SUN1O94901 812 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 RARAP10276 462 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 CHRNA5P30532 468 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PPP3CAQ08209 521 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PTK6Q13882 451 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PPP1R7Q15435 360 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 C1orf220Q5T0J3 134 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 HIBCHQ6NVY1 386 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 AADACL2Q6P093 401 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 NIPA1Q7RTP0 329 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 NOP9Q86U38 636 aaKnown RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 BANK1Q8NDB2 785 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PSPC1Q8WXF1 523 aaKnown RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 SCLT1Q96NL6 688 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 PCDHB18PQ96TA0 734 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 RANBP17Q9H2T7 1088 aaKnown RBP14.71□□□□□ -0.05
VPS33A-208ENST00000543633 NOD2Q9HC29 1040 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 WRAP73Q9P2S5 460 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms