RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 INPP5BP32019 993 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 CTNNA1P35221 906 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ECE1P42892 770 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 PTGIRP43119 386 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RBM5P52756 815 aaKnown RBP eCLIP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 EIF3BP55884 814 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 SETQ01105 290 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 GHRHRQ02643 423 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 IKQ13123 557 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ALCAMQ13740 583 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 DHX34Q14147 1143 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 EPC2Q52LR7 807 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ODR4Q5SWX8 454 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 C1orf220Q5T0J3 134 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 DMRTA1Q5VZB9 504 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 SLC30A10Q6XR72 485 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 MICALCLQ6ZW33 695 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 KSR1Q8IVT5 923 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 CNPY4Q8N129 248 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 OR2W6PQ8NHA6 318 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ALG3Q92685 438 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 KAT2BQ92831 832 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TLCD1Q96CP7 247 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 PRMT6Q96LA8 375 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 NAP1L3Q99457 506 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 AGPAT1Q99943 283 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ERP44Q9BS26 406 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 CELF4Q9BZC1 486 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RAB17Q9H0T7 212 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 THAP2Q9H0W7 228 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TMX4Q9H1E5 349 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RABEP2Q9H5N1 569 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TDRD3Q9H7E2 651 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ARHGEF10LQ9HCE6 1279 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TAS2R14Q9NYV8 317 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 CNOT8Q9UFF9 292 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RABGEF1Q9UJ41 708 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 UTP11Q9Y3A2 253 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 MRPL11Q9Y3B7 192 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 PCDHA3Q9Y5H8 950 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 GOLGB1Q14789 3259 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GMNCA6NCL1 334 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ZBBXA8MT70 800 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MIF4GDA9UHW6 222 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DHX15O43143 795 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CHMP2AO43633 222 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 HIP1RO75146 1068 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 LYPLA2O95372 231 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 GGPS1O95749 300 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CFBP00751 764 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ALAS1P13196 640 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 HSPA6P17066 643 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CTNNA2P26232 953 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 LIG3P49916 1009 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PEX5P50542 639 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CYP2J2P51589 502 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 HSD17B4P51659 736 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 SEC24CP53992 1094 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 SNRPFP62306 86 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PPP2R2AP63151 447 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DHX9Q08211 1270 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CYP1B1Q16678 543 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PTPROQ16827 1216 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 SKIDA1Q1XH10 827 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ICE2Q659A1 982 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MSL1Q68DK7 614 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CC2D2BQ6DHV5 1058 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 LYPD8Q6UX82 237 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ZDHHC24Q6UX98 284 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MMS22LQ6ZRQ5 1243 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 INTS8Q75QN2 995 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 NIPA1Q7RTP0 329 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM160B2Q86V87 743 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 SPICE1Q8N0Z3 855 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MICALL1Q8N3F8 863 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PRPF38AQ8NAV1 312 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ACER1Q8TDN7 264 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CHURC1Q8WUH1 139 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 C7orf43Q8WVR3 580 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CD101Q93033 1021 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CENPTQ96BT3 561 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CYFIP2Q96F07 1278 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 RPS6KC1Q96S38 1066 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 CSRNP1Q96S65 589 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 MXRA8Q9BRK3 442 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 LXNQ9BS40 222 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 TRIM51Q9BSJ1 452 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ZNF577Q9BSK1 485 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 TEKT3Q9BXF9 490 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ST6GALNAC4Q9H4F1 302 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 TMEM206Q9H813 350 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ERVK-5Q9HDB9 667 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 PCYOX1Q9UHG3 505 aa5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 DBR1Q9UK59 544 aaKnown RBP5.6□□□□□ -1.51
ATPAF1-212ENST00000542495 ALG6Q9Y672 507 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms