RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TAS1R3Q7RTX0 852 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SYCP3Q8IZU3 236 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PPTC7Q8NI37 304 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ZNF296Q8WUU4 475 aaPredicted RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PRPF31Q8WWY3 499 aaKnown RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SAAL1Q96ER3 474 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 CBWD1Q9BRT8 395 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 TUBGCP2Q9BSJ2 902 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 PDLIM7Q9NR12 457 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 OLFML3Q9NRN5 406 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 SETD4Q9NVD3 440 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 ODF2LQ9ULJ1 636 aa8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 GNEQ9Y223 722 aaKnown RBP8.47□□□□□ -1.05
AC005840.3-201ENST00000541888 LAMA3Q16787 3333 aa8.46□□□□□ -1.05
AC005840.3-201ENST00000541888 RBM47A0AV96 593 aaKnown RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 H3BRB1 525 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 LGR5O75473 907 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 AKAP3O75969 853 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 MYL3P08590 195 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 HOXC6P09630 235 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 C6orf222P0C671 652 aaPredicted RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 ADAM9Q13443 819 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 LAMC2Q13753 1193 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 CAPSQ13938 189 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 NOLC1Q14978 699 aaKnown RBP eCLIP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 TARBP2Q15633 366 aaKnown RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 DCAF17Q5H9S7 520 aaPredicted RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 MIIPQ5JXC2 388 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 KCNV1Q6PIU1 500 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 RHPN2Q8IUC4 686 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 TMEM130Q8N3G9 435 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 TMEM161BQ8NDZ6 487 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 ZNF507Q8TCN5 953 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 AFAP1L1Q8TED9 768 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 CACTINQ8WUQ7 758 aaKnown RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 SOCS4Q8WXH5 440 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 SLC7A3Q8WY07 619 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 ANKRD7Q92527 254 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 MRFAP1L1Q96HT8 127 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 NLRP4Q96MN2 994 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 CRACR2AQ9BSW2 395 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 MAF1Q9H063 256 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 DHX33Q9H6R0 707 aaKnown RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 KMT5AQ9NQR1 393 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 SLC5A4Q9NY91 659 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 LARSQ9P2J5 1176 aaKnown RBP8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 GINS2Q9Y248 185 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 SIP14410 1827 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 EMSYQ7Z589 1322 aa8.46□□□□□ -1.06
AC005840.3-201ENST00000541888 A0A1B0GTH6 734 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 BICDL2A1A5D9 508 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 GPR25O00155 361 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 MEN1O00255 615 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 NR3C1P04150 777 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 TRIM49P0CI25 452 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 TRIM49CP0CI26 452 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 HARSP12081 509 aaKnown RBP8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 CYBAP13498 195 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 GAP43P17677 238 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 FGFR4P22455 802 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 KLRC1P26715 233 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 FAM193AP78312 1265 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 UBXN1Q04323 297 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 DMP1Q13316 513 aaPredicted RBP8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 NR1I3Q14994 352 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 KIAA0753Q2KHM9 967 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 CCDC40Q4G0X9 1142 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 EFCAB12Q6NXP0 572 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 ARMCX5Q6P1M9 558 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 SLC39A4Q6P5W5 647 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 PRICKLE2Q7Z3G6 844 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 CYP2U1Q7Z449 544 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 PDCL2Q8N4E4 241 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 ATP8B4Q8TF62 1192 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 KAT2BQ92831 832 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 ZBTB45Q96K62 511 aaPredicted RBP8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 DRC1Q96MC2 740 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 TSG101Q99816 390 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 NOC4LQ9BVI4 516 aaKnown RBP8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 NIFKQ9BYG3 293 aaKnown RBP8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 THAP9Q9H5L6 903 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 AGPAT3Q9NRZ7 376 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 ERAP1Q9NZ08 941 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 PYCARDQ9ULZ3 195 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 THSD7BQ9C0I4 1608 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 EPHB6O15197 1021 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 B4GALT5O43286 388 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 LRRN2O75325 713 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 IQCF3P0C7M6 154 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 DLG4P78352 724 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 LRRC63Q05C16 580 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 DGKDQ16760 1214 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 COBLL1Q53SF7 1204 aa8.45□□□□□ -1.06
AC005840.3-201ENST00000541888 MARCH8Q5T0T0 291 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms