RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 FERMT3Q86UX7 667 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ZGPATQ8N5A5 531 aaKnown RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 HOOK2Q96ED9 719 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ZBED3Q96IU2 234 aaPredicted RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 RBM15Q96T37 977 aaKnown RBP eCLIP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 MEIS3Q99687 375 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ZFYVE21Q9BQ24 234 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 AARSD1Q9BTE6 412 aaKnown RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ARHGEF4Q9NR80 690 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 LRRFIP2Q9Y608 721 aaKnown RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 C9orf118A6NHY6 69 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 SNAP23O00161 211 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 MAFKO60675 156 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 MSCO60682 206 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 LRG1P02750 347 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 ITGB3P05106 788 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 RBM5P52756 815 aaKnown RBP eCLIP7□□□□□ -1.29
SUDS3-202ENST00000541280 ATP8B2P98198 1209 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 CFAP100Q494V2 611 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 TEPPQ6URK8 271 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 HHIPL2Q6UWX4 724 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 ATG9AQ7Z3C6 839 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 GOLGA6L2Q8N9W4 650 aaPredicted RBP7□□□□□ -1.29
SUDS3-202ENST00000541280 DCAF4Q8WV16 495 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 CDCA5Q96FF9 252 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 CHAMP1Q96JM3 812 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 YIPF4Q9BSR8 244 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 SLC6A20Q9NP91 592 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 MYOTQ9UBF9 498 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 ASH2LQ9UBL3 628 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 DENND2AQ9ULE3 1009 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 MSRB2Q9Y3D2 182 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 ANKRD36CQ5JPF3 1778 aa7□□□□□ -1.29
SUDS3-202ENST00000541280 DUOX1Q9NRD9 1551 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 SBF1O95248 1867 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 ADM5C9JUS6 153 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 K7ESM1 405 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 INHBEP58166 350 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 MVPQ14764 893 aaKnown RBP6.99□□□□□ -1.29
SUDS3-202ENST00000541280 ATP2B3Q16720 1220 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 HSP90AB4PQ58FF6 505 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
SUDS3-202ENST00000541280 CERS5Q8N5B7 392 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 TMEM57Q8N5G2 664 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 TXNDC5Q8NBS9 432 aaKnown RBP6.99□□□□□ -1.29
SUDS3-202ENST00000541280 KLHDC4Q8TBB5 520 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 DDX1Q92499 740 aaKnown RBP6.99□□□□□ -1.29
SUDS3-202ENST00000541280 OSBP2Q969R2 916 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 TEKT1Q969V4 418 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 TMEM209Q96SK2 561 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 PHF20Q9BVI0 1012 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 MXD3Q9BW11 206 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 DEFB129Q9H1M3 183 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 TMOD2Q9NZR1 351 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 JAG2Q9Y219 1238 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 SCN4AP35499 1836 aa6.99□□□□□ -1.29
SUDS3-202ENST00000541280 MROH6A6NGR9 719 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 KRIT1O00522 736 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 MAP4K4O95819 1239 aaPredicted RBP6.98□□□□□ -1.29
SUDS3-202ENST00000541280 PLATP00750 562 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 NTRK3Q16288 839 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 HABP4Q5JVS0 413 aaKnown RBP6.98□□□□□ -1.29
SUDS3-202ENST00000541280 GORABQ5T7V8 394 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 FKBP1CQ5VVH2 108 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 LBX2Q6XYB7 198 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 STK32CQ86UX6 486 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 ITPRIPQ8IWB1 547 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 RPAP2Q8IXW5 612 aaPredicted RBP6.98□□□□□ -1.29
SUDS3-202ENST00000541280 LGI4Q8N135 537 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 LRRC47Q8N1G4 583 aaKnown RBP6.98□□□□□ -1.29
SUDS3-202ENST00000541280 SSH3Q8TE77 659 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 BORCS6Q96GS4 357 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 PRMT6Q96LA8 375 aaPredicted RBP6.98□□□□□ -1.29
SUDS3-202ENST00000541280 WRNIP1Q96S55 665 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 SIL1Q9H173 461 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 GPR108Q9NPR9 543 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 SAGE1Q9NXZ1 904 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 DDX19BQ9UMR2 479 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 PDS5AQ29RF7 1337 aaKnown RBP6.98□□□□□ -1.29
SUDS3-202ENST00000541280 SALL1Q9NSC2 1324 aa6.98□□□□□ -1.29
SUDS3-202ENST00000541280 LRRC37AA6NMS7 1700 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 HMMRO75330 724 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 CYP7B1O75881 506 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 UQCRFS1P1P0C7P4 283 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 PABPC1P11940 636 aaKnown RBP6.97□□□□□ -1.29
SUDS3-202ENST00000541280 RBM25P49756 843 aaKnown RBP6.97□□□□□ -1.29
SUDS3-202ENST00000541280 CHAF1AQ13111 956 aaPredicted RBP6.97□□□□□ -1.29
SUDS3-202ENST00000541280 KIZQ2M2Z5 673 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 CCDC158Q5M9N0 1113 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 BORAQ6PGQ7 559 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 TMED8Q6PL24 325 aaPredicted RBP6.97□□□□□ -1.29
SUDS3-202ENST00000541280 USP53Q70EK8 1073 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 FAM83AQ86UY5 434 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 ERC1Q8IUD2 1116 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 TRIM48Q8IWZ4 208 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 YTHDC1Q96MU7 727 aaKnown RBP6.97□□□□□ -1.29
SUDS3-202ENST00000541280 CLIC6Q96NY7 704 aa6.97□□□□□ -1.29
SUDS3-202ENST00000541280 PPARGC1AQ9UBK2 798 aaKnown RBP6.97□□□□□ -1.29
SUDS3-202ENST00000541280 ZNF70Q9UC06 446 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms