RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 SYDE2Q5VT97 1194 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 ACER1Q8TDN7 264 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 SEMA4DQ92854 862 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 C9orf72Q96LT7 481 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 KREMEN1Q96MU8 473 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 OLFML3Q9NRN5 406 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 INTUQ9ULD6 942 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 TTC7AQ9ULT0 858 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 G3V3G9 751 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 GAS7O60861 476 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 DIAPH2O60879 1101 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 GJB6O95452 261 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ANP32DO95626 131 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 CRKP46108 304 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 MGAT5Q09328 741 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 RNF207Q6ZRF8 634 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ERICH1Q86X53 443 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 FITM2Q8N6M3 262 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 MIEF2Q96C03 454 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNF653Q96CK0 615 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 LXNQ9BS40 222 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZC3H12CQ9C0D7 883 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 SPAG7O75391 227 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 CRY2Q49AN0 593 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 SEL1L2Q5TEA6 688 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 CGB2Q6NT52 195 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLC13A5Q86YT5 568 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNF564Q8TBZ8 553 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 KIF9Q9HAQ2 790 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 FBXO28Q9NVF7 368 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 TOM1O60784 492 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 ADRB2P07550 413 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 GPC5P78333 572 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 LMBRD2Q68DH5 695 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 TLDC1Q6P9B6 456 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 TEKT1Q969V4 418 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 TMEM237Q96Q45 408 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 FAM167BQ9BTA0 163 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
CDC42SE1-207ENST00000540998 AFF2P51816 1311 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 GTPBP10A4D1E9 387 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 PPEF1O14829 653 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 CTNNA2P26232 953 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 CHRNA3P32297 505 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 PSMC4P43686 418 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 NT5C2P49902 561 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 AP3B2Q13367 1082 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 KIF22Q14807 665 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 CYP4F22Q6NT55 531 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 CBWD2Q8IUF1 395 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 TAB3Q8N5C8 712 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 UBL4BQ8N7F7 174 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 TDRD3Q9H7E2 651 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 MTRF1LQ9UGC7 380 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 SYNGAP1Q96PV0 1343 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 PSMD10O75832 226 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 NEBLO76041 1014 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 AGTP01019 485 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLC5A5Q92911 643 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 FAM20AQ96MK3 541 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNF570Q96NI8 536 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 DMAC2Q9NW81 257 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 DONSONQ9NYP3 566 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 CEP83Q9Y592 693 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 BTAF1O14981 1849 aa11.11□□□□□ -0.63
CDC42SE1-207ENST00000540998 ASAP2O43150 1006 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 SORBS3O60504 671 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 NQO1P15559 274 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ITGA8P53708 1063 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 FMO1Q01740 532 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ADCY2Q08462 1091 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 GRIPAP1Q4V328 841 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 SGO2Q562F6 1265 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 C3orf20Q8ND61 904 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ART4Q93070 314 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 KLHL29Q96CT2 875 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 POLR3CQ9BUI4 534 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLC16A4O15374 487 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 CFHP08603 1231 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 BMP3P12645 472 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 BRAFP15056 766 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 PSEN1P49768 467 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms