RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FGFR1OP	O95684	399 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IFNAR2	P48551	515 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PRPF4B	Q13523	1007 aa	Known RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ACVR2B	Q13705	512 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	UBE2S	Q16763	222 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DLK2	Q6UY11	383 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ARMCX2	Q7L311	632 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KCNK18	Q7Z418	384 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DAGLB	Q8NCG7	672 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC7A3	Q8WY07	619 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FAXDC2	Q96IV6	333 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TRIM51	Q9BSJ1	452 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FGFBP2	Q9BYJ0	223 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ZMYND12	Q9H0C1	365 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NOD2	Q9HC29	1040 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	XPNPEP3	Q9NQH7	507 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	WBP1L	Q9NX94	342 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MROH7	Q68CQ1	1323 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RPTOR	Q8N122	1335 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SYNGAP1	Q96PV0	1343 aa		6.11	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	FER1L6	Q2WGJ9	1857 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	BUB1B	O60566	1050 aa	Predicted RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CAND2	O75155	1236 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GGPS1	O95749	300 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SERPING1	P05155	500 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PEX19	P40855	299 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC26A2	P50443	739 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ALDH5A1	P51649	535 aa	Predicted RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ELF3	P78545	371 aa	Predicted RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	C17orf99	Q6UX52	265 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NECAB2	Q7Z6G3	386 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KCTD17	Q8N5Z5	321 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SNX29	Q8TEQ0	813 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RIT2	Q99578	217 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ELAC2	Q9BQ52	826 aa	Known RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCDC113	Q9H0I3	377 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	BLOC1S4	Q9NUP1	217 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TSKS	Q9UJT2	592 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NR2E1	Q9Y466	385 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CACNA1S	Q13698	1873 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DLEC1	Q9Y238	1755 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SHBG	P04278	402 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PRKAR2A	P13861	404 aa	Known RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DRD4	P21917	467 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	GRB10	Q13322	594 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	BFSP2	Q13515	415 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PLCB4	Q15147	1175 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	UBAP2	Q5T6F2	1119 aa	Known RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	EMC10	Q5UCC4	262 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	OLFML2B	Q68BL8	750 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	USP17L6P	Q6QN14	398 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LRRC55	Q6ZSA7	311 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	METTL13	Q8N6R0	699 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NSMCE1	Q8WV22	266 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCT6B	Q92526	530 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TATDN2	Q93075	761 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LRRC45	Q96CN5	670 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MS4A4A	Q96JQ5	239 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TSG101	Q99816	390 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	TACO1	Q9BSH4	297 aa	Known RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MTG1	Q9BT17	334 aa	Predicted RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RBPJL	Q9UBG7	517 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RNF14	Q9UBS8	474 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC9A2	Q9UBY0	812 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	EXOC7	Q9UPT5	735 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYH2	Q9UKX2	1941 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SSU72P8	A0A1W2PR75	194 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	STXBP3	O00186	592 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MAGEB2	O15479	319 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	KIF4A	O95239	1232 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	ATP6V1G2	O95670	118 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYL1	P05976	194 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	VIM	P08670	466 aa	Known RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PPP1R2	P41236	205 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLCO1A2	P46721	670 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	SLC18A3	Q16572	532 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PCNX4	Q63HM2	1172 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	RUFY4	Q6ZNE9	571 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MAEA	Q7L5Y9	396 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCDC65	Q8IXS2	484 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	DDX12P	Q92771	950 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NACC1	Q96RE7	527 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MXRA8	Q9BRK3	442 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PDCD2L	Q9BRP1	358 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	JPH1	Q9HDC5	661 aa	Predicted RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	NOC2L	Q9Y3T9	749 aa	Known RBP	6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MYH7	P12883	1935 aa		6.1	□□□□□ -1.43
RAPGEF4-215	ENST00000540783		M0R2N6	131 aa		6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	IPO5	O00410	1097 aa	Known RBP	6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	LPXN	O60711	386 aa		6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PGK2	P07205	417 aa		6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCNH	P51946	323 aa	Predicted RBP	6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	PTK2	Q05397	1052 aa		6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	MKRN4P	Q13434	485 aa	Predicted RBP	6.09	□□□□□ -1.43
RAPGEF4-215	ENST00000540783	CCDC63	Q8NA47	563 aa		6.09	□□□□□ -1.43

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