RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ACKR2O00590 384 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 EXTL3O43909 919 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 STX10O60499 249 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 PGK1P00558 417 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 ADRB2P07550 413 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 CST5P28325 142 aaPredicted RBP15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 KRT9P35527 623 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 KCNJ6P48051 423 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 FMO5P49326 533 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 VAMP7P51809 220 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 ZBED6P86452 979 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 CDC42EP1Q00587 391 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 CBWD2Q8IUF1 395 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 KIAA0319LQ8IZA0 1049 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 ZSWIM2Q8NEG5 633 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 KLHDC9Q8NEP7 349 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 NEK11Q8NG66 645 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 SAAL1Q96ER3 474 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 ACO2Q99798 780 aaKnown RBP15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 BAG1Q99933 345 aaPredicted RBP15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 MMRN2Q9H8L6 949 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 PRMT7Q9NVM4 692 aaPredicted RBP15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 LUC7L2Q9Y383 392 aaKnown RBP15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 LTBP2Q14767 1821 aa15.5■□□□□ 0.07
CYB561A3-216ENST00000540755 A0A0B4J269 797 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 C17orf102A2RUQ5 167 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 INO80B-WBP1J3KQ70 363 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 RNF225M0QZC1 329 aaPredicted RBP15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 DNM1LO00429 736 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 P4HA2O15460 535 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 N4BP1O75113 896 aaKnown RBP15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 TOM1L1O75674 476 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 VTNP04004 478 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 GNAT1P11488 350 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 GPC3P51654 580 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 GBP6Q6ZN66 633 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 TSHZ1Q6ZSZ6 1077 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 USP37Q86T82 979 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 TMC2Q8TDI7 906 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 PRIMPOLQ96LW4 560 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 DNAJC7Q99615 494 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 LSM14BQ9BX40 385 aaKnown RBP15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 INO80BQ9C086 356 aaPredicted RBP15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 PLCB1Q9NQ66 1216 aa15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 FAM207AQ9NSI2 230 aaPredicted RBP15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
CYB561A3-216ENST00000540755 A0A087WZ62 844 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 ZNF233A6NK53 670 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 PMM2O15305 246 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 ARHGAP6O43182 974 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 TRIM49P0CI25 452 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 TRIM49CP0CI26 452 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 CYP2C9P11712 490 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 PROZP22891 400 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 CHMP4BP1P59074 171 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 CYP24A1Q07973 514 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 EXOC3L4Q17RC7 722 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 SRGAP1Q7Z6B7 1085 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 ZNF397Q8NF99 534 aaPredicted RBP15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 OR8K1Q8NGG5 319 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 PLEKHO2Q8TD55 490 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 ZBTB45Q96K62 511 aaPredicted RBP15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 FDXACB1Q9BRP7 624 aaPredicted RBP15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 CRACR2AQ9BSW2 395 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 MSTO1Q9BUK6 570 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 HAPLN2Q9GZV7 340 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 MINDY3Q9H8M7 445 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 CEP72Q9P209 647 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 HDAC6Q9UBN7 1215 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 USP20Q9Y2K6 914 aa15.48■□□□□ 0.07
CYB561A3-216ENST00000540755 ABLIM1O14639 778 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 EPHB6O15197 1021 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 CLDN3O15551 220 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 NOL4O94818 638 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 PON1P27169 355 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 MCL1Q07820 350 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 HIC1Q14526 733 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 C1orf220Q5T0J3 134 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 CCSAPQ6IQ19 270 aaPredicted RBP15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 DPY19L2P1Q6NXN4 242 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 C7orf31Q8N865 590 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 PCSK9Q8NBP7 692 aaKnown RBP15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 PARD3BQ8TEW8 1205 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 NLRP7Q8WX94 980 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 ZNF668Q96K58 619 aaPredicted RBP15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 FAM213AQ9BRX8 229 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 SENP6Q9GZR1 1112 aaPredicted RBP15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 PTPRHQ9HD43 1115 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 ANKFY1Q9P2R3 1169 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 FBXL5Q9UKA1 691 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 DAAM1Q9Y4D1 1078 aa15.47■□□□□ 0.07
CYB561A3-216ENST00000540755 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 GTF2H1P32780 548 aa15.46■□□□□ 0.07
CYB561A3-216ENST00000540755 MATR3P43243 847 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms