RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 NPAS4Q8IUM7 802 aa12.63□□□□□ -0.39
TMEM258-205ENST00000540434 SCLT1Q96NL6 688 aa12.63□□□□□ -0.39
TMEM258-205ENST00000540434 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-205ENST00000540434 KIFC3Q9BVG8 833 aa12.63□□□□□ -0.39
TMEM258-205ENST00000540434 PANK2Q9BZ23 570 aa12.63□□□□□ -0.39
TMEM258-205ENST00000540434 GCOM2Q9BZD3 368 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-205ENST00000540434 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
TMEM258-205ENST00000540434 TCHHQ07283 1943 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 FSCN2O14926 492 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 B4GALT5O43286 388 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 PLCG1P19174 1290 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 LONP1P36776 959 aaKnown RBP12.62□□□□□ -0.39
TMEM258-205ENST00000540434 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
TMEM258-205ENST00000540434 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-205ENST00000540434 MBTD1Q05BQ5 628 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 MCM6Q14566 821 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 AXDND1Q5T1B0 1012 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-205ENST00000540434 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-205ENST00000540434 FEZF2Q8TBJ5 459 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 TCP11Q8WWU5 503 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 LPPQ93052 612 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 CPB2Q96IY4 423 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-205ENST00000540434 FTHL17Q9BXU8 183 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 RAB34Q9BZG1 259 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 FANCMQ8IYD8 2048 aa12.62□□□□□ -0.39
TMEM258-205ENST00000540434 ASAP2O43150 1006 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 TSPAN1O60635 241 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 HIP1RO75146 1068 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 FGFR1P11362 822 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 UBA7P41226 1012 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
TMEM258-205ENST00000540434 AFF1P51825 1210 aaKnown RBP12.61□□□□□ -0.39
TMEM258-205ENST00000540434 UBE3AQ05086 875 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 DHX8Q14562 1220 aaKnown RBP12.61□□□□□ -0.39
TMEM258-205ENST00000540434 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 LRRC55Q6ZSA7 311 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 SLC24A5Q71RS6 500 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 TAS1R3Q7RTX0 852 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 CATSPER4Q7RTX7 472 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 ZNF598Q86UK7 904 aaKnown RBP12.61□□□□□ -0.39
TMEM258-205ENST00000540434 ECHDC2Q86YB7 292 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-205ENST00000540434 AK8Q96MA6 479 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 PKD1L2Q7Z442 2459 aa12.61□□□□□ -0.39
TMEM258-205ENST00000540434 DENND3A2RUS2 1198 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 DCDC2BA2VCK2 349 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 SPTLC2O15270 562 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 GAS2O43903 313 aaKnown RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 BMP15O95972 392 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 SSBP05455 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 CDC42EP1Q00587 391 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 MXD4Q14582 209 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 STK38Q15208 465 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 CLLU1OSQ5K130 101 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 PLPP4Q5VZY2 271 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 SRGAP1Q7Z6B7 1085 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 EXOC8Q8IYI6 725 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 MCPH1Q8NEM0 835 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 CASD1Q96PB1 797 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 EIF2AQ9BY44 585 aaKnown RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 CXCL16Q9H2A7 254 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
TMEM258-205ENST00000540434 PIN4Q9Y237 131 aaKnown RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 MORC2Q9Y6X9 1032 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-205ENST00000540434 A0A0U1RQF3 1178 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 LRRIQ4A6NIV6 560 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 INO80B-WBP1J3KQ70 363 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 FGF18O76093 207 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 ARF4P18085 180 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-205ENST00000540434 PHKA2P46019 1235 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 POU5F1BQ06416 359 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 NT5DC1Q5TFE4 455 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 CDCA2Q69YH5 1023 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-205ENST00000540434 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
TMEM258-205ENST00000540434 ZNF710Q8N1W2 664 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 SMG8Q8ND04 991 aaKnown RBP12.59□□□□□ -0.39
TMEM258-205ENST00000540434 RUBCNQ92622 972 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 RAD54LQ92698 747 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 COL26A1Q96A83 441 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 ZNF396Q96N95 335 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-205ENST00000540434 INO80BQ9C086 356 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-205ENST00000540434 FZD8Q9H461 694 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 STK24Q9Y6E0 443 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
TMEM258-205ENST00000540434 MYH11P35749 1972 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms