RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 LILRA6Q6PI73 481 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 CPLX2Q6PUV4 134 aaKnown RBP22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 POTEGQ6S5H5 508 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 GSTCDQ8NEC7 633 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 CPB2Q96IY4 423 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 MTRQ99707 1265 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 GPR62Q9BZJ7 368 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 PRKD2Q9BZL6 878 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 TBC1D17Q9HA65 648 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 PIDD1Q9HB75 910 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 XPNPEP1Q9NQW7 623 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 ZDHHC7Q9NXF8 308 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 FNIP2Q9P278 1114 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 WDR87Q6ZQQ6 2873 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 ANHXE9PGG2 379 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 REC8O95072 547 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 RFX1P22670 979 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 SPIRE1Q08AE8 756 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 USP41Q3LFD5 358 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 KCNG4Q8TDN1 519 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 GPR152Q8TDT2 470 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 DYDC2Q96IM9 177 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 B3GALT6Q96L58 329 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 LARP6Q9BRS8 491 aaKnown RBP22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 PHF20Q9BVI0 1012 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 CYP46A1Q9Y6A2 500 aa22.22■■□□□ 1.15
LPCAT3-210ENST00000540090 INO80B-WBP1J3KQ70 363 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 CCNT1O60563 726 aaKnown RBP22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 SLITRK3O94933 977 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 CTTNQ14247 550 aaKnown RBP22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 AMHR2Q16671 573 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 FUT10Q6P4F1 479 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 NAP1L4Q99733 375 aaKnown RBP22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 SLC2A4RGQ9NR83 387 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 DLGAP2Q9P1A6 1054 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 SIT1Q9Y3P8 196 aa22.21■■□□□ 1.15
LPCAT3-210ENST00000540090 MARCH6O60337 910 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 ARF4P18085 180 aaPredicted RBP22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 MBTD1Q05BQ5 628 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 HTR4Q13639 388 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 TFDP1Q14186 410 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 NCAPH2Q6IBW4 605 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 HACE1Q8IYU2 909 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 APOL6Q9BWW8 343 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 ARHGEF3Q9NR81 526 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 R4GN57 208 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 ZNF292O60281 2723 aa22.2■■□□□ 1.14
LPCAT3-210ENST00000540090 DCNP07585 359 aaKnown RBP22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 ARL2P36404 184 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 CYP4A11Q02928 519 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 STK3Q13188 491 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 GET4Q7L5D6 327 aaPredicted RBP22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 POTEDQ86YR6 584 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 TPH2Q8IWU9 490 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 RIN2Q8WYP3 895 aaPredicted RBP22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 NFKBIZQ9BYH8 718 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 TRIM6Q9C030 488 aaPredicted RBP22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 NXF3Q9H4D5 531 aaKnown RBP22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 ADAM28Q9UKQ2 775 aa22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 ZFP37Q9Y6Q3 630 aaPredicted RBP22.19■■□□□ 1.14
LPCAT3-210ENST00000540090 DOCK8Q8NF50 2099 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 EPB41L2O43491 1005 aaKnown RBP22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 ZMYND10O75800 440 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 AKAP5P24588 427 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 CREMQ03060 361 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 SPECC1Q5M775 1068 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 DCLRE1AQ6PJP8 1040 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 PIK3AP1Q6ZUJ8 805 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 C1orf210Q8IVY1 113 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 SLFN12Q8IYM2 578 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 OXER1Q8TDS5 423 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 ASAP3Q8TDY4 903 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 HSD17B14Q9BPX1 270 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 TM6SF1Q9BZW5 370 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 NUMBLQ9Y6R0 609 aa22.18■■□□□ 1.14
LPCAT3-210ENST00000540090 CACNA1AO00555 2505 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 DNAH14Q0VDD8 3507 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 A0A1B0GUA9 196 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 DGAT1O75907 488 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 LYPLA2O95372 231 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 BAG4O95429 457 aaKnown RBP22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 SP9P0CG40 484 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 RPL17P18621 184 aaKnown RBP22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 GRIK3Q13003 919 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 CAPSQ13938 189 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 GLYCTKQ8IVS8 523 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 RMDN1Q96DB5 314 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 ANKEF1Q9NU02 776 aa22.17■■□□□ 1.14
LPCAT3-210ENST00000540090 ZMYM2Q9UBW7 1377 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 DMXL1Q9Y485 3027 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 TADA2AO75478 443 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 XBP1P17861 261 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 GLRA2P23416 452 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 STARD6P59095 220 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 EARS2Q5JPH6 523 aaKnown RBP22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 SLC27A1Q6PCB7 646 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 RABGGTAQ92696 567 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 EIF2AK1Q9BQI3 630 aaKnown RBP22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 RPP25Q9BUL9 199 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms