RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 IKZF4Q9H2S9 585 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 SEMA6BQ9H3T3 888 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 RGS18Q9NS28 235 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 A0A0B4J269 797 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 ENPP3O14638 875 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 KIAA0391O15091 583 aaKnown RBP16.85■□□□□ 0.29
DDB1-216ENST00000539739 CLIC2O15247 247 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
DDB1-216ENST00000539739 ERCC5P28715 1186 aaPredicted RBP16.85■□□□□ 0.29
DDB1-216ENST00000539739 SLC24A5Q71RS6 500 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 HACE1Q8IYU2 909 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 VWCEQ96DN2 955 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 CDT1Q9H211 546 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 FAM105AQ9NUU6 356 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
DDB1-216ENST00000539739 PCDH10Q9P2E7 1040 aa16.85■□□□□ 0.29
DDB1-216ENST00000539739 AGO2Q9UKV8 859 aaKnown RBP16.85■□□□□ 0.29
DDB1-216ENST00000539739 TET1Q8NFU7 2136 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 A0A0U1RQF3 1178 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 TISP43B9A030 160 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 BAIAP3O94812 1187 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 LDHAP00338 332 aaKnown RBP16.84■□□□□ 0.29
DDB1-216ENST00000539739 RPL13P26373 211 aaKnown RBP16.84■□□□□ 0.29
DDB1-216ENST00000539739 ADSSP30520 456 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 KYAT1Q16773 422 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 EDRF1Q3B7T1 1238 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 UBXN11Q5T124 520 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 ZNF365Q70YC5 407 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 RTN4RL1Q86UN2 441 aaPredicted RBP16.84■□□□□ 0.29
DDB1-216ENST00000539739 C12orf56Q8IXR9 622 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 CBWD1Q9BRT8 395 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 FUCA2Q9BTY2 467 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
DDB1-216ENST00000539739 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 RWDD2AQ9UIY3 292 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 PCDHB2Q9Y5E7 798 aa16.84■□□□□ 0.29
DDB1-216ENST00000539739 ABLIM1O14639 778 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 OGTO15294 1046 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 MAGEA10P43363 369 aaPredicted RBP16.83■□□□□ 0.28
DDB1-216ENST00000539739 STX17P56962 302 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 MLLT1Q03111 559 aaPredicted RBP16.83■□□□□ 0.28
DDB1-216ENST00000539739 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 NFIL3Q16649 462 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 TCTN1Q2MV58 587 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 TMEM240Q5SV17 173 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 ANKRD40Q6AI12 368 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 FOXR2Q6PJQ5 311 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 C16orf59Q7L2K0 433 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 DNAJC25Q9H1X3 360 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 MTIF3Q9H2K0 278 aaKnown RBP16.83■□□□□ 0.28
DDB1-216ENST00000539739 HSPBP1Q9NZL4 362 aa16.83■□□□□ 0.28
DDB1-216ENST00000539739 LTBP2Q14767 1821 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 TRIM49BA6NDI0 452 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 C9IYK1 514 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 ZNF623O75123 536 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 NR3C1P04150 777 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
DDB1-216ENST00000539739 KCNJ6P48051 423 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 CYP2J2P51589 502 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 FKBP3Q00688 224 aaKnown RBP16.82■□□□□ 0.28
DDB1-216ENST00000539739 ADAM9Q13443 819 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
DDB1-216ENST00000539739 ANO6Q4KMQ2 910 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 ZCWPW2Q504Y3 356 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 SLC9A9Q8IVB4 645 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 XXYLT1Q8NBI6 393 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 LINC01599Q8WXQ3 324 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 PGBD4Q96DM1 585 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.82■□□□□ 0.286e-8■□□□□ 9.7
DDB1-216ENST00000539739 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
DDB1-216ENST00000539739 KIAA1586Q9HCI6 787 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 IPPQ9Y573 584 aa16.82■□□□□ 0.28
DDB1-216ENST00000539739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 H0YGN5 161 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 RBAK-RBAKDNI3L0D1 243 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 CETN3O15182 167 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 EXOC3O60645 756 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 FGFR1OPO95684 399 aaKnown RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 CAVIN2O95810 425 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 EOMESO95936 686 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 NR2F2P24468 414 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 FAM189BP81408 668 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 LRSAM1Q6UWE0 723 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 C11orf57Q6ZUT1 292 aaPredicted RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 ECHDC2Q86YB7 292 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 HAPLN2Q9GZV7 340 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 DMAC2Q9NW81 257 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 LRFN2Q9ULH4 789 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 FRMD4BQ9Y2L6 1034 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 PCDHB7Q9Y5E2 793 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 EXTL3O43909 919 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 AMHP03971 560 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 STAG3L1P0CL83 205 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms