RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GDF11O95390 407 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
CDH13-204ENST00000539548 NF2P35240 595 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 PDE6CP51160 858 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 C1orf220Q5T0J3 134 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 DCAF8Q5TAQ9 597 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 HIBCHQ6NVY1 386 aaPredicted RBP10.38□□□□□ -0.75
CDH13-204ENST00000539548 EXOC3L1Q86VI1 746 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 FAM71AQ8IYT1 594 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 SERPINB12Q96P63 405 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 MTFR1LQ9H019 292 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 UNC45AQ9H3U1 944 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 TMEM206Q9H813 350 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 WHRNQ9P202 907 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 FAM170AA1A519 330 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 SNX3O60493 162 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 SGPL1O95470 568 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 CFBP00751 764 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 ELF1P32519 619 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 SLCO1A2P46721 670 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 ZNF746Q6NUN9 644 aaPredicted RBP10.38□□□□□ -0.75
CDH13-204ENST00000539548 CRELD2Q6UXH1 353 aaPredicted RBP10.38□□□□□ -0.75
CDH13-204ENST00000539548 MIGA2Q7L4E1 593 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 NOP9Q86U38 636 aaKnown RBP10.38□□□□□ -0.75
CDH13-204ENST00000539548 UHMK1Q8TAS1 419 aaKnown RBP10.38□□□□□ -0.75
CDH13-204ENST00000539548 EPS8L1Q8TE68 723 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 NRXN2Q9P2S2 1712 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 ANKRD31Q8N7Z5 1873 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 FSCN2O14926 492 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 SPOPO43791 374 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 ECEL1O95672 775 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 VIL1P09327 827 aaKnown RBP10.37□□□□□ -0.75
CDH13-204ENST00000539548 GCLMP48507 274 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 RWDD2BP57060 319 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 FKBP1AP62942 108 aaKnown RBP10.37□□□□□ -0.75
CDH13-204ENST00000539548 JAG1P78504 1218 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
CDH13-204ENST00000539548 PODNQ7Z5L7 613 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 ZNF564Q8TBZ8 553 aaPredicted RBP10.37□□□□□ -0.75
CDH13-204ENST00000539548 ACCSQ96QU6 501 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 LXNQ9BS40 222 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 ZNF577Q9BSK1 485 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 NUP85Q9BW27 656 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 TEKT3Q9BXF9 490 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 PCIF1Q9H4Z3 704 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 ATP6V0A4Q9HBG4 840 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 UVRAGQ9P2Y5 699 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 GTF3C4Q9UKN8 822 aa10.37□□□□□ -0.75
CDH13-204ENST00000539548 USP15Q9Y4E8 981 aaPredicted RBP10.37□□□□□ -0.75
CDH13-204ENST00000539548 A0A1W2PRG0 241 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 K7ENM7 598 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 TP73O15350 636 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 GH2P01242 217 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 ARP10275 920 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 ITIH2P19823 946 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 KCNJ1P48048 391 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 IFNAR2P48551 515 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 SNRPFP62306 86 aaKnown RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 RASA3Q14644 834 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 GALNTL6Q49A17 601 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 TLDC1Q6P9B6 456 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 RHBDF2Q6PJF5 856 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 PADI6Q6TGC4 694 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 RNF207Q6ZRF8 634 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 XXYLT1Q8NBI6 393 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 PSPC1Q8WXF1 523 aaKnown RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 RIT2Q99578 217 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 CDC42EP4Q9H3Q1 356 aaKnown RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 LARSQ9P2J5 1176 aaKnown RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 CHORDC1Q9UHD1 332 aaPredicted RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 PTPN22Q9Y2R2 807 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 ATP5DP30049 168 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 STAT2P52630 851 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 MFAP3P55082 362 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 FMO1Q01740 532 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 ZNF268Q14587 947 aaPredicted RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 CCDC38Q502W7 563 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 SYDE1Q6ZW31 735 aaPredicted RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 CCDC25Q86WR0 208 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 KIAA0825Q8IV33 1275 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 SHC3Q92529 594 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 ARHGEF2Q92974 986 aaKnown RBP10.36□□□□□ -0.75
CDH13-204ENST00000539548 KAT5Q92993 513 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 KREMEN1Q96MU8 473 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 PLCD4Q9BRC7 762 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 TMEM117Q9H0C3 514 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 CCDC113Q9H0I3 377 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 VEZTQ9HBM0 779 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 ABCF3Q9NUQ8 709 aa10.36□□□□□ -0.75
CDH13-204ENST00000539548 HSPBP1Q9NZL4 362 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms