RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 A6NNZ2 444 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 K7ENM7 598 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 PLA2G6O60733 806 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 UBE4BO95155 1302 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 MYH11P35749 1972 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 TUBB8Q3ZCM7 444 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 EMSYQ7Z589 1322 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 SPATS2Q86XZ4 545 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 SYCP3Q8IZU3 236 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 RPTORQ8N122 1335 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 ALG3Q92685 438 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 MIEF2Q96C03 454 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 KCND2Q9NZV8 630 aa13.53□□□□□ -0.24
SFSWAP-208ENST00000539506 ATMINO43313 823 aaPredicted RBP13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 MUTP22033 750 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 GCLMP48507 274 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 PHLDB2Q86SQ0 1253 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 RFFLQ8WZ73 363 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 RIT2Q99578 217 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 DEFB129Q9H1M3 183 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 FEM1BQ9UK73 627 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 CCPG1Q9ULG6 757 aa13.52□□□□□ -0.24
SFSWAP-208ENST00000539506 LMNB1P20700 586 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 RARRES1P49788 294 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 CUL1Q13616 776 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 KIF22Q14807 665 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 CCDC63Q8NA47 563 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 BTBD6Q96KE9 485 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 PCNTO95613 3336 aa13.52□□□□□ -0.25
SFSWAP-208ENST00000539506 ATP6V1G2O95670 118 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 ICAM1P05362 532 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 DR1Q01658 176 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 TRIP13Q15645 432 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 TKFCQ3LXA3 575 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 NSMCE1Q8WV22 266 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 DYDC1Q8WWB3 177 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 HOMER2Q9NSB8 354 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 AMFRQ9UKV5 643 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 TCRBV7S2A1N4TA0A589 114 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 ATP9AO75110 1047 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM160B2Q86V87 743 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 CPXCR1Q8N123 301 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 PWWP2AQ96N64 755 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM167BQ9BTA0 163 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 INTS9Q9NV88 658 aaKnown RBP13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
SFSWAP-208ENST00000539506 CCT8L1PA6NM43 557 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 RGS16O15492 202 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 TBC1D12O60347 775 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 VPS41P49754 854 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ZDHHC14Q8IZN3 488 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ATP8B4Q8TF62 1192 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 SEC14L1Q92503 715 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 KRT35Q92764 455 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 PCDHB18PQ96TA0 734 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 AGPAT1Q99943 283 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 KCNK9Q9NPC2 374 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 CTNNAL1Q9UBT7 734 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 PSME4Q14997 1843 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ACSL3O95573 720 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 P4HBP07237 508 aaKnown RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 TNFAIP3P21580 790 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 VAMP7P51809 220 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 TRAF1Q13077 416 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 NAIF1Q69YI7 327 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 LRIG3Q6UXM1 1119 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 FAM118BQ9BPY3 351 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 RAVER2Q9HCJ3 691 aaKnown RBP13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 UBIAD1Q9Y5Z9 338 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 GOLGA8IPA6NC78 632 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 GOLGA8JA6NMD2 632 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 UBOX5O94941 541 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ADRB2P07550 413 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 BCRP11274 1271 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 ADSSP30520 456 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 PMS2P54278 862 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 BIRC3Q13489 604 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 SNX1Q13596 522 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 EMC10Q5UCC4 262 aa13.5□□□□□ -0.25
SFSWAP-208ENST00000539506 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms