RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SEMA4DQ92854 862 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 SYT11Q9BT88 431 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 ERAP1Q9NZ08 941 aa22.08■■□□□ 1.12
DDX55-205ENST00000538744 H2AFZP0C0S5 128 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 PRLRP16471 622 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 MAPK4P31152 587 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 MATR3P43243 847 aaKnown RBP eCLIP22.07■■□□□ 1.12
DDX55-205ENST00000538744 LAMTOR4Q0VGL1 99 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 MKRN4PQ13434 485 aaPredicted RBP22.07■■□□□ 1.12
DDX55-205ENST00000538744 CDCA2Q69YH5 1023 aaPredicted RBP22.07■■□□□ 1.12
DDX55-205ENST00000538744 ZPBP2Q6X784 338 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 H2AFVQ71UI9 128 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 SV2AQ7L0J3 742 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 PLEKHH3Q7Z736 793 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 ZBTB8OSQ8IWT0 167 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 OLIG1Q8TAK6 271 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 LNX1Q8TBB1 728 aaPredicted RBP22.07■■□□□ 1.12
DDX55-205ENST00000538744 NT5C1BQ96P26 610 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 MSTO1Q9BUK6 570 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 C2orf40Q9H1Z8 148 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 RAB20Q9NX57 234 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 TSKSQ9UJT2 592 aa22.07■■□□□ 1.12
DDX55-205ENST00000538744 A0A0B4J269 797 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 SRGAP2O75044 1071 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 MFAP3P55082 362 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 NLRP11P59045 1033 aaKnown RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 CLDN10P78369 228 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 IFI16Q16666 785 aaKnown RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 PPM1KQ8N3J5 372 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 LRRC71Q8N4P6 559 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 EMID1Q96A84 441 aaPredicted RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 ZBTB45Q96K62 511 aaPredicted RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 FNBP1Q96RU3 617 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 HAPLN2Q9GZV7 340 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 KATNBL1Q9H079 304 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 CCDC113Q9H0I3 377 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 PDCL3Q9H2J4 239 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 ANKFY1Q9P2R3 1169 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 HYOU1Q9Y4L1 999 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 PCDHGC5Q9Y5F6 944 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 EDN1P05305 212 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 TNFAIP3P21580 790 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 CST9Q5W186 159 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 GLYCTKQ8IVS8 523 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 PPTC7Q8NI37 304 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 TAS1R2Q8TE23 839 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 RPGRIP1Q96KN7 1286 aa22.06■■□□□ 1.12
DDX55-205ENST00000538744 MRPL4Q9BYD3 311 aaKnown RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 ARGLU1Q9NWB6 273 aaPredicted RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 SUCLA2Q9P2R7 463 aaPredicted RBP22.06■■□□□ 1.12
DDX55-205ENST00000538744 ADGRA2Q96PE1 1338 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 SNAI1O95863 264 aaPredicted RBP22.05■■□□□ 1.12
DDX55-205ENST00000538744 LGALS2P05162 132 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 TCP1P17987 556 aaKnown RBP22.05■■□□□ 1.12
DDX55-205ENST00000538744 ACOT2P49753 483 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 TFDP1Q14186 410 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 ZNF484Q5JVG2 852 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 GJC2Q5T442 439 aaPredicted RBP22.05■■□□□ 1.12
DDX55-205ENST00000538744 CRELD2Q6UXH1 353 aaPredicted RBP22.05■■□□□ 1.12
DDX55-205ENST00000538744 TRAPPC12Q8WVT3 735 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 MAML3Q96JK9 1138 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 CAPZA3Q96KX2 299 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 SRCAPQ6ZRS2 3230 aa22.05■■□□□ 1.12
DDX55-205ENST00000538744 A0A0A6YYK5 440 aaPredicted RBP22.04■■□□□ 1.12
DDX55-205ENST00000538744 ZC3H11AO75152 810 aaKnown RBP eCLIP22.04■■□□□ 1.125e-6■□□□□ 9.7
DDX55-205ENST00000538744 PALMO75781 387 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 SRGAP2CP0DJJ0 459 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 ADCYAP1R1P41586 468 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 HUNKP57058 714 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 C15orf39Q6ZRI6 1047 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 RNF149Q8NC42 400 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 CAGE1Q8TC20 777 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 SHC3Q92529 594 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 KAT5Q92993 513 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 KREMEN1Q96MU8 473 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 AGPAT1Q99943 283 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 RBAKQ9NYW8 714 aaPredicted RBP22.04■■□□□ 1.12
DDX55-205ENST00000538744 ZSWIM8A7E2V4 1837 aa22.04■■□□□ 1.12
DDX55-205ENST00000538744 SLC15A5A6NIM6 579 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 MSCO60682 206 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 PRKCBP05771 671 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 ZSCAN20P17040 1043 aaPredicted RBP22.03■■□□□ 1.12
DDX55-205ENST00000538744 MAPK6Q16659 721 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 RHPN2Q8IUC4 686 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 FAM71AQ8IYT1 594 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 HELQQ8TDG4 1101 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 FAM81BQ96LP2 452 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 OSBPL9Q96SU4 736 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 CLDN3O15551 220 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 TOM1L1O75674 476 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 TNNI1P19237 187 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 USP8P40818 1118 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 EFCAB12Q6NXP0 572 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 AFG1LQ8WV93 481 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 ZNF516Q92618 1163 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 MMS19Q96T76 1030 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 TLR10Q9BXR5 811 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 EPC1Q9H2F5 836 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 RNPEPQ9H4A4 650 aa22.03■■□□□ 1.12
DDX55-205ENST00000538744 NMRK2Q9NPI5 230 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms