RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 YWHAHQ04917 246 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 TAS2R42Q7RTR8 314 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 CDCA5Q96FF9 252 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 L3MBTL3Q96JM7 780 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 CABS1Q96KC9 395 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 AAASQ9NRG9 546 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 IP6K2Q9UHH9 426 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 TXNDC9O14530 226 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ASAP2O43150 1006 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 FGGP02679 453 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ANTXR2P58335 489 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 PPP4CP60510 307 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 MRPS25P82663 173 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 DDR1Q08345 913 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 PDIA5Q14554 519 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 KCTD16Q68DU8 428 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 USP50Q70EL3 339 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 PYROXD1Q8WU10 500 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 MUC3BQ9H195 1237 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 KLHL11Q9NVR0 708 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 FBXO2Q9UK22 296 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 WDR91A4D1P6 747 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 WNT10BO00744 389 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 STAG3L1P0CL83 205 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 NPEPPSP55786 919 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ETF1P62495 437 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 NCOA4Q13772 614 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ZNF235Q14590 738 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 SNX17Q15036 470 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 HABP4Q5JVS0 413 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 ANKRD40Q6AI12 368 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ARHGAP24Q8N264 748 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 DHX38Q92620 1227 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 PBXIP1Q96AQ6 731 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 RBM41Q96IZ5 413 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 FAM49BQ9NUQ9 324 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 H3BRJ5 948 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 GPR182O15218 404 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 MT-ND3P03897 115 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 SEZ6Q53EL9 994 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 KLC3Q6P597 504 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 SZRD1Q7Z422 152 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 HASPINQ8TF76 798 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 RMDN1Q96DB5 314 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ABI2Q9NYB9 513 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 G3BP2Q9UN86 482 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 BCL9O00512 1426 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ASMTLO95671 621 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ESRRBO95718 433 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 IL1R1P14778 569 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 STX1BP61266 288 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 GNGT1P63211 74 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 BFSP2Q13515 415 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 BRD3Q15059 726 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 SNRNP35Q16560 246 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 FMR1NBQ8N0W7 255 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 TTC39CQ8N584 583 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 STKLD1Q8NE28 680 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 CPA5Q8WXQ8 436 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 RMDN2Q96LZ7 410 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 PANX2Q96RD6 677 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 PITPNM2Q9BZ72 1349 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 E5RI56 91 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ZC3H11AO75152 810 aaKnown RBP eCLIP5.7□□□□□ -1.5
LRP6-203ENST00000538239 CA4P22748 312 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 IFNAR2P48551 515 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 KPNA2P52292 529 aaKnown RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 ZNF211Q13398 564 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 NAA25Q14CX7 972 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 KIZQ2M2Z5 673 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 TRIM67Q6ZTA4 783 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 ADGRA1Q86SQ6 560 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 RASSF3Q86WH2 238 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 BHMTQ93088 406 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 GPRASP2Q96D09 838 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 EDEM3Q9BZQ6 932 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 CYP26B1Q9NR63 512 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 TMEM39AQ9NV64 488 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 KLHL14Q9P2G3 628 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 TTC7AQ9ULT0 858 aaPredicted RBP5.7□□□□□ -1.5
LRP6-203ENST00000538239 SYNGAP1Q96PV0 1343 aa5.7□□□□□ -1.5
LRP6-203ENST00000538239 TPI1P60174 286 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 HERVK_113P62684 666 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 ARHGAP15Q53QZ3 475 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 GAS2L3Q86XJ1 694 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 GPATCH11Q8N954 259 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 PCSK9Q8NBP7 692 aaKnown RBP5.69□□□□□ -1.5
LRP6-203ENST00000538239 TRIM62Q9BVG3 475 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 PXMP2Q9NR77 195 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 ABHD10Q9NUJ1 306 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 CDC23Q9UJX2 597 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 ARHGEF28Q8N1W1 1705 aaKnown RBP5.69□□□□□ -1.5
LRP6-203ENST00000538239 SNX2O60749 519 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 ZRANB2O95218 330 aaKnown RBP eCLIP5.69□□□□□ -1.5
LRP6-203ENST00000538239 IL18RAPO95256 599 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 CLCN3P51790 818 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 RAD51Q06609 339 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 RCN2Q14257 317 aa5.69□□□□□ -1.5
LRP6-203ENST00000538239 GOLGA7BQ2TAP0 167 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms