RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 RPS6KC1Q96S38 1066 aa23.65■■□□□ 1.38
CCDC78-215ENST00000538176 NTPCRQ9BSD7 190 aaKnown RBP23.65■■□□□ 1.38
CCDC78-215ENST00000538176 APOL6Q9BWW8 343 aa23.65■■□□□ 1.38
CCDC78-215ENST00000538176 EMILIN2Q9BXX0 1053 aa23.65■■□□□ 1.38
CCDC78-215ENST00000538176 CCDC169A6NNP5 214 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 AKAP5P24588 427 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 LONP1P36776 959 aaKnown RBP23.64■■□□□ 1.37
CCDC78-215ENST00000538176 OR1G1P47890 313 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 SCNN1GP51170 649 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 SMTNP53814 917 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 ZRSR1Q15695 479 aaKnown RBP23.64■■□□□ 1.37
CCDC78-215ENST00000538176 ZFP42Q96MM3 310 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 PDZD7Q9H5P4 517 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 CD320Q9NPF0 282 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 MRPL17Q9NRX2 175 aaKnown RBP23.64■■□□□ 1.37
CCDC78-215ENST00000538176 HCFC2Q9Y5Z7 792 aa23.64■■□□□ 1.37
CCDC78-215ENST00000538176 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.63■■□□□ 1.37
CCDC78-215ENST00000538176 VPS37CA5D8V6 355 aaPredicted RBP23.63■■□□□ 1.37
CCDC78-215ENST00000538176 CLASP2O75122 1294 aaKnown RBP23.63■■□□□ 1.37
CCDC78-215ENST00000538176 HIP1RO75146 1068 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 SOD2P04179 222 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 PDIA4P13667 645 aaKnown RBP23.63■■□□□ 1.37
CCDC78-215ENST00000538176 NPTX2P47972 431 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 PEX3P56589 373 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 ITIH3Q06033 890 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 CABP7Q86V35 215 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 CDR2LQ86X02 465 aaPredicted RBP23.63■■□□□ 1.37
CCDC78-215ENST00000538176 GPR65Q8IYL9 337 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 GSTCDQ8NEC7 633 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 VN1R2Q8NFZ6 395 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 KMT5AQ9NQR1 393 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 MIOSQ9NXC5 875 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 TNFSF13BQ9Y275 285 aa23.63■■□□□ 1.37
CCDC78-215ENST00000538176 K7ELQ4 463 aaPredicted RBP23.62■■□□□ 1.37
CCDC78-215ENST00000538176 SCP2P22307 547 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 SF3A1Q15459 793 aaKnown RBP23.62■■□□□ 1.37
CCDC78-215ENST00000538176 ATF7IP2Q5U623 682 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 CES5AQ6NT32 575 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 SPIRE2Q8WWL2 714 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 SUSD6Q92537 303 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 PNMA5Q96PV4 448 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 PHF7Q9BWX1 381 aaPredicted RBP23.62■■□□□ 1.37
CCDC78-215ENST00000538176 DZANK1Q9NVP4 752 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 DPP7Q9UHL4 492 aa23.62■■□□□ 1.37
CCDC78-215ENST00000538176 USP15Q9Y4E8 981 aaPredicted RBP23.62■■□□□ 1.37
CCDC78-215ENST00000538176 H0YCG3 227 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 B4GALT3O60512 393 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 THP07101 528 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 PLA2G4BP0C869 781 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 LIG1P18858 919 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 SYT1P21579 422 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 KCNK18Q7Z418 384 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 BCL7CQ8WUZ0 217 aaPredicted RBP23.61■■□□□ 1.37
CCDC78-215ENST00000538176 NECTIN4Q96NY8 510 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 RUSC1Q9BVN2 902 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 MRPL4Q9BYD3 311 aaKnown RBP23.61■■□□□ 1.37
CCDC78-215ENST00000538176 S1PR5Q9H228 398 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 LARSQ9P2J5 1176 aaKnown RBP23.61■■□□□ 1.37
CCDC78-215ENST00000538176 ARHGAP28Q9P2N2 729 aa23.61■■□□□ 1.37
CCDC78-215ENST00000538176 TDRD15B5MCY1 1934 aaKnown RBP23.61■■□□□ 1.37
CCDC78-215ENST00000538176 C1RP00736 705 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 SSBP05455 408 aaKnown RBP eCLIP23.6■■□□□ 1.37
CCDC78-215ENST00000538176 URODP06132 367 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 SLC12A3P55017 1021 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 TUSC3Q13454 348 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 PTPN14Q15678 1187 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 TMEM119Q4V9L6 283 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 LLGL2Q6P1M3 1020 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 ELMSAN1Q6PJG2 1045 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 DAW1Q8N136 415 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 HERC2P3Q9BVR0 1158 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 ZSCAN16Q9H4T2 348 aaPredicted RBP23.6■■□□□ 1.37
CCDC78-215ENST00000538176 EPHX3Q9H6B9 360 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 POLD4Q9HCU8 107 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 SNTG2Q9NY99 539 aa23.6■■□□□ 1.37
CCDC78-215ENST00000538176 PRG3Q9Y2Y8 225 aaPredicted RBP23.6■■□□□ 1.37
CCDC78-215ENST00000538176 GPR37L1O60883 481 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 LILRB3O75022 631 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 PLS3P13797 630 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 STRN3Q13033 797 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 CBX2Q14781 532 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-215ENST00000538176 NT5DC1Q5TFE4 455 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 KIAA1841Q6NSI8 718 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 SYCE2Q6PIF2 218 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 RNF168Q8IYW5 571 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-215ENST00000538176 SNX21Q969T3 373 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 KIFC3Q9BVG8 833 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 VN1R3Q9BXE9 311 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 ADAM7Q9H2U9 754 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 MARCH5Q9NX47 278 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 KLK14Q9P0G3 267 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 ODF2LQ9ULJ1 636 aa23.59■■□□□ 1.37
CCDC78-215ENST00000538176 TTLL13PA6NNM8 815 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 DCXO43602 365 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 EFEMP2O95967 443 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 KLRC2P26717 231 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 ABCD1P33897 745 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 RBM10P98175 930 aaKnown RBP23.58■■□□□ 1.37
CCDC78-215ENST00000538176 MAPK7Q13164 816 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 RASSF8Q8NHQ8 419 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms