RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 FOXN3O00409 490 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 UBOX5O94941 541 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 ECEL1O95672 775 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 NDUFB10O96000 172 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 RARAP10276 462 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 ZNF76P36508 570 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 PSEN1P49768 467 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 CYP2J2P51589 502 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 CALCOCO2Q13137 446 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 PPP2R5CQ13362 524 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 ALCAMQ13740 583 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 SIX1Q15475 284 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 PHLDB3Q6NSJ2 640 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 AADACL2Q6P093 401 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 SYDE1Q6ZW31 735 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 INTS8Q75QN2 995 aaKnown RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 TBC1D1Q86TI0 1168 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 CCDC105Q8IYK2 499 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 DYDC1Q8WWB3 177 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 TCP11Q8WWU5 503 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 IFT74Q96LB3 600 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 CDC42EP4Q9H3Q1 356 aaKnown RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 LRRC19Q9H756 370 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 RGL1Q9NZL6 768 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
CPSF7-218ENST00000537641 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 C15orf41Q9Y2V0 281 aa13.04□□□□□ -0.32
CPSF7-218ENST00000537641 IGLV3-22A0A075B6J6 115 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 EXOC3O60645 756 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 GDF11O95390 407 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 GJB6O95452 261 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 COMTP21964 271 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 MAN1A1P33908 653 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 SKIV2L2P42285 1042 aaKnown RBP13.03□□□□□ -0.32
CPSF7-218ENST00000537641 BNIP1Q12981 228 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 COG2Q14746 738 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 FAM133BQ5BKY9 247 aaKnown RBP13.03□□□□□ -0.32
CPSF7-218ENST00000537641 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 ZDHHC14Q8IZN3 488 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 SLC20A1Q8WUM9 679 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 MAIP1Q8WWC4 291 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 CKAP2Q8WWK9 683 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 DYDC2Q96IM9 177 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
CPSF7-218ENST00000537641 STRA6Q9BX79 667 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 ECT2Q9H8V3 914 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
CPSF7-218ENST00000537641 AGAP1Q9UPQ3 857 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 ARL2BPQ9Y2Y0 163 aa13.03□□□□□ -0.32
CPSF7-218ENST00000537641 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 ANKRD63C9JTQ0 380 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 MAPK13O15264 365 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 PMM2O15305 246 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 LRRN2O75325 713 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 TCEA3O75764 348 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 PSMD10O75832 226 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 SLITRK3O94933 977 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 GH2P01242 217 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 CYP1A2P05177 515 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 CLTAP09496 248 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 MAPTP10636 758 aaKnown RBP13.02□□□□□ -0.32
CPSF7-218ENST00000537641 BMP3P12645 472 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 CCND1P24385 295 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 IFNAR2P48551 515 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 PRELPP51888 382 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 COPS2P61201 443 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 CAV1Q03135 178 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 TRAF1Q13077 416 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.32
CPSF7-218ENST00000537641 MESDQ14696 234 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 KCTD19Q17RG1 926 aaPredicted RBP13.02□□□□□ -0.32
CPSF7-218ENST00000537641 RHBDF2Q6PJF5 856 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 OTOP1Q7RTM1 612 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.32
CPSF7-218ENST00000537641 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 SLC5A5Q92911 643 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 ARHGEF2Q92974 986 aaKnown RBP13.02□□□□□ -0.32
CPSF7-218ENST00000537641 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.32
CPSF7-218ENST00000537641 NACC1Q96RE7 527 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 CSRNP1Q96S65 589 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 TMOD2Q9NZR1 351 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 UVRAGQ9P2Y5 699 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 ZNF536O15090 1300 aa13.02□□□□□ -0.32
CPSF7-218ENST00000537641 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 WFS1O76024 890 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms