RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CYP4F11Q9HBI6 524 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 MAP3K2Q9Y2U5 619 aa7.46□□□□□ -1.22
CCDC7-208ENST00000537047 NRP2O60462 931 aa7.45□□□□□ -1.22
CCDC7-208ENST00000537047 FKBP9O95302 570 aa7.45□□□□□ -1.22
CCDC7-208ENST00000537047 LTA4HP09960 611 aaKnown RBP7.45□□□□□ -1.22
CCDC7-208ENST00000537047 SCNN1BP51168 640 aa7.45□□□□□ -1.22
CCDC7-208ENST00000537047 NRG3P56975 720 aa7.45□□□□□ -1.22
CCDC7-208ENST00000537047 SART3Q15020 963 aaKnown RBP7.45□□□□□ -1.22
CCDC7-208ENST00000537047 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
CCDC7-208ENST00000537047 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
CCDC7-208ENST00000537047 CMTR2Q8IYT2 770 aaKnown RBP7.45□□□□□ -1.22
CCDC7-208ENST00000537047 BBC3Q96PG8 261 aaPredicted RBP7.45□□□□□ -1.22
CCDC7-208ENST00000537047 ZAR1LA6NP61 321 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 RNASET2O00584 256 aaKnown RBP7.44□□□□□ -1.22
CCDC7-208ENST00000537047 ITGA10O75578 1167 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 LSSP48449 732 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 CCDC142Q17RM4 750 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 CCDC178Q5BJE1 867 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 CT83Q5H943 113 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 GLB1L2Q8IW92 636 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 ARHGEF19Q8IW93 802 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 CPEB3Q8NE35 698 aaKnown RBP7.44□□□□□ -1.22
CCDC7-208ENST00000537047 APPBP2Q92624 585 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 DCLRE1CQ96SD1 692 aaKnown RBP7.44□□□□□ -1.22
CCDC7-208ENST00000537047 NEU1Q99519 415 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 EMC7Q9NPA0 242 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 SYBUQ9NX95 663 aa7.44□□□□□ -1.22
CCDC7-208ENST00000537047 WNT10BO00744 389 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 ADCY6O43306 1168 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 PPFIA4O75335 1185 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 PLA2G5P39877 138 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 PDCD1Q15116 288 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 DALRD3Q5D0E6 543 aaKnown RBP7.43□□□□□ -1.22
CCDC7-208ENST00000537047 METRNLQ641Q3 311 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 FRMD7Q6ZUT3 714 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 PRIMA1Q86XR5 153 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 CDC5LQ99459 802 aaKnown RBP7.43□□□□□ -1.22
CCDC7-208ENST00000537047 ADAM2Q99965 735 aa7.43□□□□□ -1.22
CCDC7-208ENST00000537047 EPN1Q9Y6I3 576 aaPredicted RBP7.43□□□□□ -1.22
CCDC7-208ENST00000537047 LGALS4P56470 323 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 TP53BP2Q13625 1128 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 DDB1Q16531 1140 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 MFSD14BQ5SR56 506 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 PPM1KQ8N3J5 372 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 LCORLQ8N3X6 602 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 OR2W6PQ8NHA6 318 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 OR14C36Q8NHC7 312 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 SNX33Q8WV41 574 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 ZNF764Q96H86 408 aaPredicted RBP7.42□□□□□ -1.22
CCDC7-208ENST00000537047 KCTD10Q9H3F6 313 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 POGKQ9P215 609 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 CDY2AQ9Y6F7 541 aa7.42□□□□□ -1.22
CCDC7-208ENST00000537047 TBKBP1A7MCY6 615 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 CTSSP25774 331 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 PTH2RP49190 550 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 FOXI1Q12951 378 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 PRAMEF14Q5SWL7 426 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 DRICH1Q6PGQ1 229 aaPredicted RBP7.41□□□□□ -1.22
CCDC7-208ENST00000537047 ADGRG3Q86Y34 549 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 REPS2Q8NFH8 660 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 SLC35B2Q8TB61 432 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 SLC5A5Q92911 643 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 GPRC5DQ9NZD1 345 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 PTGFRNQ9P2B2 879 aa7.41□□□□□ -1.22
CCDC7-208ENST00000537047 USP15Q9Y4E8 981 aaPredicted RBP7.41□□□□□ -1.22
CCDC7-208ENST00000537047 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
CCDC7-208ENST00000537047 MASP2O00187 686 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 RAB11FIP3O75154 756 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 USP14P54578 494 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 OCRLQ01968 901 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 BMT2Q1RMZ1 405 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 FAM102AQ5T9C2 384 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-208ENST00000537047 EFCAB12Q6NXP0 572 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 PLXDC1Q8IUK5 500 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 SUPT20HQ8NEM7 779 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 LEO1Q8WVC0 666 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-208ENST00000537047 ASB10Q8WXI3 467 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 TFAP2CQ92754 450 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 EAF2Q96CJ1 260 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-208ENST00000537047 DRC1Q96MC2 740 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 R3HDMLQ9H3Y0 253 aa7.4□□□□□ -1.22
CCDC7-208ENST00000537047 GAGE12BA1L429 117 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 TYRP1P17643 537 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 MRPS21P82921 87 aaKnown RBP7.39□□□□□ -1.23
CCDC7-208ENST00000537047 C19orf54Q5BKX5 351 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 UBXN4Q92575 508 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 PHACTR3Q96KR7 559 aa7.39□□□□□ -1.23
CCDC7-208ENST00000537047 NOC2LQ9Y3T9 749 aaKnown RBP7.39□□□□□ -1.23
CCDC7-208ENST00000537047 GSG1L2A8MUP6 293 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 B5MCH6 92 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 CDC45O75419 566 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 SPDEFO95238 335 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 BMPR1AP36894 532 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 ID4P47928 161 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 CHN2P52757 468 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 SEC24CP53992 1094 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 GUCY1B3Q02153 619 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms