RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 ZBTB8OSQ8IWT0 167 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 ZNF454Q8N9F8 522 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 CNNM3Q8NE01 707 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 VN1R2Q8NFZ6 395 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 URGCPQ8TCY9 931 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 BCL7CQ8WUZ0 217 aaPredicted RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 TMEM169Q96HH4 297 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 MSLNLQ96KJ4 702 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 CDCA3Q99618 268 aaPredicted RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 KIFC3Q9BVG8 833 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 CCDC113Q9H0I3 377 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 FZD8Q9H461 694 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 NXF3Q9H4D5 531 aaKnown RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 NRDE2Q9H7Z3 1164 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 TLE6Q9H808 572 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 NGRNQ9NPE2 291 aaKnown RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 ENTPD7Q9NQZ7 604 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 PRMT7Q9NVM4 692 aaPredicted RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 CLEC1BQ9P126 229 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 DNAJB4Q9UDY4 337 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 HES2Q9Y543 173 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 VWA3AA6NCI4 1184 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 ARL5CA6NH57 179 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 E9PMD0 336 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 DDHD2O94830 711 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 EYA4O95677 639 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 POMCP01189 267 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 GALTP07902 379 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 ITGA4P13612 1032 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 ANP32AP39687 249 aaKnown RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 SLC11A1P49279 550 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 RBM10P98175 930 aaKnown RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 SMAD4Q13485 552 aaKnown RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 ARL6IP4Q66PJ3 421 aaKnown RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 SLC27A1Q6PCB7 646 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 BRAPQ7Z569 592 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 CDR2LQ86X02 465 aaPredicted RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 FAM178BQ8IXR5 827 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 GJD3Q8N144 294 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 SMRP1Q8NCR6 262 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 DEPTORQ8TB45 409 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 IGSF21Q96ID5 467 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 ZFP42Q96MM3 310 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 GAD1Q99259 594 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 RUSC1Q9BVN2 902 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 VN1R3Q9BXE9 311 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 GBP3Q9H0R5 595 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 C2orf40Q9H1Z8 148 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 POLD4Q9HCU8 107 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 UBN1Q9NPG3 1134 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 KANSL3Q9P2N6 904 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 CD207Q9UJ71 328 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 BARX2Q9UMQ3 279 aaPredicted RBP9.77□□□□□ -0.85
CHD4-204ENST00000535810 DNM3Q9UQ16 869 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 FAM50BQ9Y247 325 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 TRIOO75962 3097 aa9.77□□□□□ -0.85
CHD4-204ENST00000535810 FSD2A1L4K1 749 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 VPS37CA5D8V6 355 aaPredicted RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 C2orf71A6NGG8 1288 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 MBTPS2O43462 519 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 NPTXRO95502 500 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 EDN1P05305 212 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 PRKCBP05771 671 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 PDCP20941 246 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 ZP2Q05996 745 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 COASYQ13057 564 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 PRPF4BQ13523 1007 aaKnown RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 KCNC3Q14003 757 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 SMC1AQ14683 1233 aaKnown RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 PPP2R5AQ15172 486 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 ZRSR1Q15695 479 aaKnown RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 SMAD2Q15796 467 aaKnown RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 MAPK6Q16659 721 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 HYIQ5T013 277 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 C1orf186Q6ZWK4 172 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 TMC7Q7Z402 723 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 HACE1Q8IYU2 909 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 DAW1Q8N136 415 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 MRPL43Q8N983 215 aaKnown RBP9.76□□□□□ -0.85
CHD4-204ENST00000535810 GSTCDQ8NEC7 633 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 IFT74Q96LB3 600 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 PNMA5Q96PV4 448 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 TMEM175Q9BSA9 504 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 APOL6Q9BWW8 343 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 ZBP1Q9H171 429 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 PDZD7Q9H5P4 517 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 USP20Q9Y2K6 914 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 GIT1Q9Y2X7 761 aa9.76□□□□□ -0.85
CHD4-204ENST00000535810 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
CHD4-204ENST00000535810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.75□□□□□ -0.85
CHD4-204ENST00000535810 ACKR2O00590 384 aa9.75□□□□□ -0.85
CHD4-204ENST00000535810 N4BP3O15049 544 aa9.75□□□□□ -0.85
CHD4-204ENST00000535810 HIP1RO75146 1068 aa9.75□□□□□ -0.85
CHD4-204ENST00000535810 BMP15O95972 392 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms