RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 VSIG10LQ86VR7 867 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 ANKRD18AQ8IVF6 992 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 CNPY4Q8N129 248 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 SYNPOQ8N3V7 929 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 FLCNQ8NFG4 579 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 CAGE1Q8TC20 777 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 IQCDQ96DY2 449 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 CCDC120Q96HB5 630 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 RNPC3Q96LT9 517 aaKnown RBP7.27□□□□□ -1.25
USP28-202ENST00000535607 RHOXF2Q9BQY4 288 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 IER2Q9BTL4 223 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 ISCA1Q9BUE6 129 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 TSGA10Q9BZW7 698 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 ACTR5Q9H9F9 607 aaPredicted RBP7.27□□□□□ -1.25
USP28-202ENST00000535607 GPR108Q9NPR9 543 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 CYP26B1Q9NR63 512 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 SEMA3GQ9NS98 782 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 CWC25Q9NXE8 425 aaPredicted RBP7.27□□□□□ -1.25
USP28-202ENST00000535607 FAM169AQ9Y6X4 670 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 U3KQE9 123 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 CDHR2Q9BYE9 1310 aa7.27□□□□□ -1.25
USP28-202ENST00000535607 TRBV23OR9-2A0A075B6M9 112 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 ANO9A1A5B4 782 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 C2orf71A6NGG8 1288 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 GOLGA8BA8MQT2 603 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 KRT86O43790 486 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 ZEB2O60315 1214 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 HSF2BPO75031 334 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 IGKV5-2P06315 115 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 FAM153BP0C7A2 387 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 FGFR1P11362 822 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 EZRP15311 586 aaKnown RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 VAV1P15498 845 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 ZNF18P17022 549 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 HSD3B2P26439 372 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 HNRNPH1P31943 449 aaKnown RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 RFC4P35249 363 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 ADKP55263 362 aaKnown RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 VSNL1P62760 191 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 SUMO1P63165 101 aaKnown RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 GUCY1B3Q02153 619 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 KIF23Q02241 960 aaPredicted RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 POSTNQ15063 836 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 TCEA2Q15560 299 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 RILPL1Q5EBL4 403 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 ZNF662Q6ZS27 426 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 ZNF589Q86UQ0 364 aaPredicted RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 ARFGAP2Q8N6H7 521 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 PRPF38AQ8NAV1 312 aaKnown RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 NCOA7Q8NI08 942 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 DPF2Q92785 391 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 P3H4Q92791 437 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 MRGPRX3Q96LB0 322 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 MYD88Q99836 296 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 NKX2-4Q9H2Z4 354 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 PCMTD2Q9NV79 361 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 GNL3LQ9NVN8 582 aaKnown RBP7.26□□□□□ -1.25
USP28-202ENST00000535607 HPCAL4Q9UM19 191 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 SUFUQ9UMX1 484 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 PCDHA11Q9Y5I1 949 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 SAR1BQ9Y6B6 198 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 LRP5O75197 1615 aa7.26□□□□□ -1.25
USP28-202ENST00000535607 MYH3P11055 1940 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 NRXN2Q9P2S2 1712 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 KLF18A0A0U1RQI7 1052 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ESYT3A0FGR9 886 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 PSMD14O00487 310 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 EIF3HO15372 352 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP28-202ENST00000535607 RNF113AO15541 343 aaKnown RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 MFAP3LO75121 409 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 FSBPO95073 299 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 EPB41P11171 864 aaKnown RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 PABPC1P11940 636 aaKnown RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 SLC8A1P32418 973 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 CYLC1P35663 651 aaPredicted RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 IRAK1P51617 712 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ZP2Q05996 745 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ITIH3Q06033 890 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 DUSP4Q13115 394 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 PNOCQ13519 176 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 SLMAPQ14BN4 828 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 MSMPQ1L6U9 139 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 GLE1Q53GS7 698 aaKnown RBP7.25□□□□□ -1.25
USP28-202ENST00000535607 ZMYM1Q5SVZ6 1142 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 EEF1DP3Q658K8 133 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ARMC9Q7Z3E5 817 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ZNF34Q8IZ26 560 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 SLC35F6Q8N357 371 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 BCAS4Q8TDM0 211 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP28-202ENST00000535607 PNKPQ96T60 521 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 DHRS4Q9BTZ2 278 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 LGR4Q9BXB1 951 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 FTOQ9C0B1 505 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP28-202ENST00000535607 NYXQ9GZU5 481 aa7.25□□□□□ -1.25
USP28-202ENST00000535607 EPC1Q9H2F5 836 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms