RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 C12orf42Q96LP6 360 aa9.71□□□□□ -0.85
SF3B2-216ENST00000534765 PLEKHG4BQ96PX9 1271 aa9.71□□□□□ -0.85
SF3B2-216ENST00000534765 ZNF862O60290 1169 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 TACC1O75410 805 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 STBD1O95210 358 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 PGK2P07205 417 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 TRIM21P19474 475 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 PRPF4BQ13523 1007 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 QPCTQ16769 361 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 SLC5A9Q2M3M2 681 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 CCDC92Q53HC0 331 aaPredicted RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ANKRD20A2Q5SQ80 823 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 NOL9Q5SY16 702 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ANKRD20A1Q5TYW2 823 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ANKRD20A3Q5VUR7 823 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 NANOGNBQ7Z5D8 188 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 IFT20Q8IY31 132 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 SYT2Q8N9I0 419 aaPredicted RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 RPS6KC1Q96S38 1066 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 RMDN3Q96TC7 470 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 TTYH3Q9C0H2 523 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 EXOC1Q9NV70 894 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 PAIP2BQ9ULR5 123 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 MRPL11Q9Y3B7 192 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 REXO2Q9Y3B8 237 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 DOCK3Q8IZD9 2030 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 EYSQ5T1H1 3165 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 A8MUI8 341 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 CYP2C8P10632 490 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ZNF76P36508 570 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 NPEPPSP55786 919 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 TMEM266Q2M3C6 531 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 MDM1Q8TC05 714 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 CNOT6LQ96LI5 555 aaKnown RBP9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ZNF570Q96NI8 536 aa9.71□□□□□ -0.86
SF3B2-216ENST00000534765 ZSWIM8A7E2V4 1837 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 MGAMO43451 1857 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 TTC26A0AVF1 554 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 USO1O60763 962 aaKnown RBP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 SP4Q02446 784 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 KCNMA1Q12791 1236 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 RNF207Q6ZRF8 634 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 NCAPG2Q86XI2 1143 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 CSGALNACT2Q8N6G5 542 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 LXNQ9BS40 222 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 KIFC3Q9BVG8 833 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 TAF1DQ9H5J8 278 aaPredicted RBP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 PREBQ9HCU5 417 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 SOCS7O14512 581 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 TGFB1I1O43294 461 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 AKR1B10O60218 316 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 CEP104O60308 925 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 FESP07332 822 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 LINGO3P0C6S8 592 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 FAM200BP0CF97 657 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ALDH3A1P30838 453 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 VPS41P49754 854 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 P3H1Q32P28 736 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 LMBRD2Q68DH5 695 aaPredicted RBP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 CNNM4Q6P4Q7 775 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 RINLQ6ZS11 566 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ATL2Q8NHH9 583 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 TRIM47Q96LD4 638 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 VCX3BQ9H321 246 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 VCX3AQ9NNX9 186 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 LUC7L2Q9Y383 392 aaKnown RBP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 XIRP2A4UGR9 3374 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ZSCAN5CA6NGD5 496 aaPredicted RBP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 IGF2BP3O00425 579 aaKnown RBP eCLIP9.7□□□□□ -0.86
SF3B2-216ENST00000534765 MARCH6O60337 910 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 CCNE1P24864 410 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 DRP2Q13474 957 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 SLMAPQ14BN4 828 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ALS2CLQ60I27 953 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ARHGAP18Q8N392 663 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 CCHCR1Q8TD31 782 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 IFT74Q96LB3 600 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ATP6V1G3Q96LB4 118 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 ZHX3Q9H4I2 956 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 PFASO15067 1338 aa9.7□□□□□ -0.86
SF3B2-216ENST00000534765 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 RCCD1A6NED2 376 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 ARIH2O95376 493 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 ETS2P15036 469 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 PCNX4Q63HM2 1172 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 TLDC1Q6P9B6 456 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 EEPD1Q7L9B9 569 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 VSIG1Q86XK7 387 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 OPTNQ96CV9 577 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 TCHPQ9BT92 498 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 NAA15Q9BXJ9 866 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms