RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 YARSP54577 528 aaKnown RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 HSPA2P54652 639 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 NAPAP54920 295 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 ASIC1P78348 528 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 GUCY1A3Q02108 690 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 ICA1Q05084 483 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 PDCLQ13371 301 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 FRG1Q14331 258 aaKnown RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 OASLQ15646 514 aaKnown RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 SHROOM1Q2M3G4 852 aaPredicted RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 PLEKHA7Q6IQ23 1121 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 KLHL10Q6JEL2 608 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 CYB5D1Q6P9G0 228 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 EXOC3L1Q86VI1 746 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 RHOT2Q8IXI1 618 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 RIBC1Q8N443 379 aaPredicted RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 RDM1Q8NG50 284 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 SLC35G2Q8TBE7 412 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 ZNF398Q8TD17 642 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 SLC7A6OSQ96CW6 309 aaPredicted RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 ZNF570Q96NI8 536 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 NLRP3Q96P20 1036 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 PSMD1Q99460 953 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 EIF2AK1Q9BQI3 630 aaKnown RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 HAPLN2Q9GZV7 340 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 INTS2Q9H0H0 1204 aaKnown RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 WNT8AQ9H1J5 351 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 FAM124BQ9H5Z6 455 aaPredicted RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 EPB41L5Q9HCM4 733 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 TFCP2L1Q9NZI6 479 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 BIN2Q9UBW5 565 aaPredicted RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 ZNF112Q9UJU3 913 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 TPX2Q9ULW0 747 aaKnown RBP4.25□□□□□ -1.73
ATM-221ENST00000533690 PLA2G4CQ9UP65 541 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 EFR3BQ9Y2G0 817 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 RABGAP1Q9Y3P9 1069 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 SYNGAP1Q96PV0 1343 aa4.25□□□□□ -1.73
ATM-221ENST00000533690 CALUO43852 315 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 SMNDC1O75940 238 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATM-221ENST00000533690 FDX1P10109 184 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 ALOX15P16050 662 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 TRIM21P19474 475 aaKnown RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 TMOD1P28289 359 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 ETV4P43268 484 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 TNNC1P63316 161 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 SETQ01105 290 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 GCNT1Q02742 428 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 HEATR3Q7Z4Q2 680 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 SFR1Q86XK3 245 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 PHF13Q86YI8 300 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 CCDC65Q8IXS2 484 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 KATNAL2Q8IYT4 538 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 LINC01465Q8N7H1 131 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 SNX29Q8TEQ0 813 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 CPLX3Q8WVH0 158 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 C10orf82Q8WW14 230 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 CABS1Q96KC9 395 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 KCNK13Q9HB14 408 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 KLC4Q9NSK0 619 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 STARD13Q9Y3M8 1113 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 DDTLA6NHG4 134 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 TRIM64BA6NI03 449 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 RSPH10B2B2RC85 870 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 PES1O00541 588 aaKnown RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 ASTN2O75129 1339 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 CAND2O75155 1236 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 ATP2C2O75185 946 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 ERLIN2O94905 339 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 IGHA2P01877 340 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 RSPH10BP0C881 870 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 L1CAMP32004 1257 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 MAGEA12P43365 314 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 GABRB2P47870 512 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 NEK3P51956 506 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 RPL26P61254 145 aaKnown RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 PPP3CAQ08209 521 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 BFSP1Q12934 665 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 UBE2SQ16763 222 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 CCDC40Q4G0X9 1142 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 TMEM259Q4ZIN3 620 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 STRIP1Q5VSL9 837 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 LRRC38Q5VT99 294 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 DAB2IPQ5VWQ8 1189 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 PCNX4Q63HM2 1172 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 TPTE2Q6XPS3 522 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 LEKR1Q6ZMV7 388 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 CROCCP2Q86T23 111 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 ZNF677Q86XU0 584 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 APLFQ8IW19 511 aaPredicted RBP4.24□□□□□ -1.73
ATM-221ENST00000533690 FAM133AQ8N9E0 248 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 SEMA4DQ92854 862 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 COA7Q96BR5 231 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 VCPIP1Q96JH7 1222 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 C12orf42Q96LP6 360 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 AGPAT1Q99943 283 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 DPH5Q9H2P9 285 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 UNC45AQ9H3U1 944 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 PPCSQ9HAB8 311 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 OSGEPQ9NPF4 335 aa4.24□□□□□ -1.73
ATM-221ENST00000533690 UBN1Q9NPG3 1134 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms