RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 K7ERI5 159 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 PLA2G4BP0C869 781 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 SLC12A3P55017 1021 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 GRIN1Q05586 938 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 DSC1Q08554 894 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 KCNC3Q14003 757 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 SMAD2Q15796 467 aaKnown RBP33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 GSTCDQ8NEC7 633 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 CALML4Q96GE6 196 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 STK39Q9UEW8 545 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 MTMR6Q9Y217 621 aa33.37■■■□□ 2.93
SSSCA1-207ENST00000533115 CTSAP10619 480 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 CA8P35219 290 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 NT5DC1Q5TFE4 455 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 TMEM184AQ6ZMB5 413 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 VN1R3Q9BXE9 311 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 KMT5AQ9NQR1 393 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 KCND2Q9NZV8 630 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 KLK14Q9P0G3 267 aa33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 DAXXQ9UER7 740 aaPredicted RBP33.36■■■□□ 2.93
SSSCA1-207ENST00000533115 PHLPP2Q6ZVD8 1323 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 SRGAP2BP0DMP2 458 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 OR1G1P47890 313 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 ATF7IP2Q5U623 682 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 EEF1DP3Q658K8 133 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 SMRP1Q8NCR6 262 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 TMEM134Q9H6X4 195 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 CD320Q9NPF0 282 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 SNTG2Q9NY99 539 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 ARHGAP28Q9P2N2 729 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 PRKAG3Q9UGI9 489 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 IRAK3Q9Y616 596 aa33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 TDRD15B5MCY1 1934 aaKnown RBP33.35■■■□□ 2.93
SSSCA1-207ENST00000533115 SFI1A8K8P3 1242 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 RAD51AP2Q09MP3 1159 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 GIT2Q14161 759 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 PTPAQ15257 358 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 DCAF4L1Q3SXM0 396 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 LLGL2Q6P1M3 1020 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 FAM173BQ6P4H8 233 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 AUTS2Q8WXX7 1259 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 RPS6KC1Q96S38 1066 aa33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 PRG3Q9Y2Y8 225 aaPredicted RBP33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 RBM19Q9Y4C8 960 aaKnown RBP33.34■■■□□ 2.93
SSSCA1-207ENST00000533115 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP33.33■■■□□ 2.93
SSSCA1-207ENST00000533115 STX6O43752 255 aa33.33■■■□□ 2.93
SSSCA1-207ENST00000533115 GRIK3Q13003 919 aa33.33■■■□□ 2.93
SSSCA1-207ENST00000533115 GJD3Q8N144 294 aa33.33■■■□□ 2.93
SSSCA1-207ENST00000533115 MARCH5Q9NX47 278 aa33.33■■■□□ 2.93
SSSCA1-207ENST00000533115 CLASP2O75122 1294 aaKnown RBP33.32■■■□□ 2.92
SSSCA1-207ENST00000533115 NR1I2O75469 434 aa33.32■■■□□ 2.92
SSSCA1-207ENST00000533115 NTPCRQ9BSD7 190 aaKnown RBP33.32■■■□□ 2.92
SSSCA1-207ENST00000533115 ZSCAN16Q9H4T2 348 aaPredicted RBP33.32■■■□□ 2.92
SSSCA1-207ENST00000533115 KCNG1Q9UIX4 513 aa33.32■■■□□ 2.92
SSSCA1-207ENST00000533115 TNFSF13BQ9Y275 285 aa33.32■■■□□ 2.92
SSSCA1-207ENST00000533115 SLC16A4O15374 487 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 PLS3P13797 630 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 SSTR3P32745 418 aaPredicted RBP33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 ZP2Q05996 745 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 KARSQ15046 597 aaKnown RBP33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 ARSHQ5FYA8 562 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 ANKRD54Q6NXT1 300 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 TAS1R3Q7RTX0 852 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 APBB1IPQ7Z5R6 666 aaPredicted RBP33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 HSCBQ8IWL3 235 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 ADHFE1Q8IWW8 467 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 RASSF8Q8NHQ8 419 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 SPIRE2Q8WWL2 714 aa33.31■■■□□ 2.92
SSSCA1-207ENST00000533115 RECQL4O94761 1208 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 MARCKSP29966 332 aaPredicted RBP33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 PTPN14Q15678 1187 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 TMEM87AQ8NBN3 555 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 LRRC15Q8TF66 581 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 CASP10Q92851 521 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 ACO2Q99798 780 aaKnown RBP33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 COLEC11Q9BWP8 271 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 MRPL4Q9BYD3 311 aaKnown RBP33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 BLOC1S4Q9NUP1 217 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 HCFC2Q9Y5Z7 792 aa33.3■■■□□ 2.92
SSSCA1-207ENST00000533115 NPHP3-ACAD11A0A0J9YXS1 232 aa33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 PLCG1P19174 1290 aa33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 SMTNP53814 917 aa33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 CCSER1Q9C0I3 900 aa33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 FBXO2Q9UK22 296 aaPredicted RBP33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 USP15Q9Y4E8 981 aaPredicted RBP33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 SRPRBQ9Y5M8 271 aaKnown RBP33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 C5orf42Q9H799 3197 aa33.29■■■□□ 2.92
SSSCA1-207ENST00000533115 SOD2P04179 222 aa33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 CACNB1Q02641 598 aaPredicted RBP33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 CEBPZQ03701 1054 aaKnown RBP33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 GPBP1Q86WP2 473 aa33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 RAD54LQ92698 747 aa33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 GDAQ9Y2T3 454 aa33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 MYH11P35749 1972 aa33.28■■■□□ 2.92
SSSCA1-207ENST00000533115 C19orf67A6NJJ6 358 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 F8W810 466 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 PTGESO14684 152 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 EFEMP2O95967 443 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 DHX8Q14562 1220 aaKnown RBP33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 EPSTI1Q96J88 318 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms