RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CSPG5O95196 566 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZWINTO95229 277 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 RPN1P04843 607 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PGK2P07205 417 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CCDC166P0CW27 439 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SERPINB6P35237 376 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 HSPA9P38646 679 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 USP46P62068 366 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ESRRGP62508 458 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PHEXP78562 749 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 KCTD2Q14681 263 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 RCN1Q15293 331 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 QRICH1Q2TAL8 776 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 GRAMD1BQ3KR37 738 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM47CQ5HY64 1035 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ARHGEF16Q5VV41 709 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 DAB2IPQ5VWQ8 1189 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CHADLQ6NUI6 762 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 RASSF3Q86WH2 238 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ADGRF4Q8IZF3 695 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SRBD1Q8N5C6 995 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 OXER1Q8TDS5 423 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CASKIN2Q8WXE0 1202 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF570Q96NI8 536 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PURBQ96QR8 312 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 LZTS2Q9BRK4 669 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 DDX47Q9H0S4 455 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CCDC68Q9H2F9 335 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 THAP9Q9H5L6 903 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SPATA7Q9P0W8 599 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 LIMA1Q9UHB6 759 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZFP69BQ9UJL9 534 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 A0A1W2PQC6 194 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM205CA6NFA0 338 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CAPN9O14815 690 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 HNRNPCL1O60812 293 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PALMO75781 387 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SCG2P13521 617 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF18P17022 549 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PTPREP23469 700 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ADCY7P51828 1080 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PMS2P54278 862 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 AP2B1P63010 937 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ADCY1Q08828 1119 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF268Q14587 947 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SNX30Q5VWJ9 437 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ADAT2Q7Z6V5 191 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 KSR1Q8IVT5 923 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 REXO1Q8N1G1 1221 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 TRIML2Q8N7C3 387 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SYMPKQ92797 1274 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF668Q96K58 619 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CNOT6LQ96LI5 555 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CFAP57Q96MR6 1250 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 TBC1D23Q9NUY8 699 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SPDYE5A6NIY4 337 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 O00370 1275 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 P4HA2O15460 535 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 RAD51CO43502 376 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 LINGO3P0C6S8 592 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 DRD4P21917 467 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 QPCTQ16769 361 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF658Q5TYW1 1059 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 C16orf87Q6PH81 154 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 USP50Q70EL3 339 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 TMEM110Q86TL2 294 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 IQCKQ8N0W5 287 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 IGDCC4Q8TDY8 1250 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 PAGE5Q96GU1 130 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 ABCF3Q9NUQ8 709 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 INTS13Q9NVM9 706 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 EHD2Q9NZN4 543 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 COL1A1P02452 1464 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 C10orf71Q711Q0 1435 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 PDE2AO00408 941 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 THAP12O43422 761 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 KDM1AO60341 852 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 GLI1P08151 1106 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 GNA11P29992 359 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 SERPINB8P50452 374 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 MTTPP55157 894 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 JAG1P78504 1218 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 DCTN2Q13561 401 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 WASHC2DQ5SRD0 308 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 DTHD1Q6ZMT9 781 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 SYT2Q8N9I0 419 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 TBC1D5Q92609 795 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 AMNQ9BXJ7 453 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 LACRTQ9GZZ8 138 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 MAF1Q9H063 256 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 PARVBQ9HBI1 364 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 SRPRBQ9Y5M8 271 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 AOC2O75106 756 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 STK10O94804 968 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 S100BP04271 92 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM153BP0C7A2 387 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 BRAFP15056 766 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 IGBP1P78318 339 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 TBL3Q12788 808 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms