RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 ARHGAP28Q9P2N2 729 aa17.09■□□□□ 0.33
CTSB-225ENST00000532409 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
CTSB-225ENST00000532409 PUF60Q9UHX1 559 aaKnown RBP17.09■□□□□ 0.33
CTSB-225ENST00000532409 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
CTSB-225ENST00000532409 MYH11P35749 1972 aa17.09■□□□□ 0.33
CTSB-225ENST00000532409 TDRD15B5MCY1 1934 aaKnown RBP17.08■□□□□ 0.33
CTSB-225ENST00000532409 K7ERI5 159 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 N4BP3O15049 544 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 INPPL1O15357 1258 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 EFNA5P52803 228 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 PTCRAQ6ISU1 281 aaPredicted RBP17.08■□□□□ 0.32
CTSB-225ENST00000532409 TMC7Q7Z402 723 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 VPS52Q8N1B4 723 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 EFHBQ8N7U6 833 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 RAD54LQ92698 747 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
CTSB-225ENST00000532409 REEP2Q9BRK0 252 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 CCSER1Q9C0I3 900 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 ZSCAN16Q9H4T2 348 aaPredicted RBP17.08■□□□□ 0.32
CTSB-225ENST00000532409 UBN1Q9NPG3 1134 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 MARCH5Q9NX47 278 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 CLEC1BQ9P126 229 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 BARX2Q9UMQ3 279 aaPredicted RBP17.08■□□□□ 0.32
CTSB-225ENST00000532409 GIT1Q9Y2X7 761 aa17.08■□□□□ 0.32
CTSB-225ENST00000532409 SRPRBQ9Y5M8 271 aaKnown RBP17.08■□□□□ 0.32
CTSB-225ENST00000532409 PHLPP2Q6ZVD8 1323 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 NRP1O14786 923 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 RECQL4O94761 1208 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 PLS3P13797 630 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 CA8P35219 290 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 NDUFV1P49821 464 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 DSC1Q08554 894 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 DUSP6Q16828 381 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 HACE1Q8IYU2 909 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 CEP120Q8N960 986 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 RSPH1Q8WYR4 309 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
CTSB-225ENST00000532409 ZBP1Q9H171 429 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
CTSB-225ENST00000532409 GRXCR2A6NFK2 248 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 SLC26A4O43511 780 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 NCK2O43639 380 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 OR1G1P47890 313 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
CTSB-225ENST00000532409 LLGL2Q6P1M3 1020 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 ZBTB33Q86T24 672 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 MRPL43Q8N983 215 aaKnown RBP17.06■□□□□ 0.32
CTSB-225ENST00000532409 TMEM161BQ8NDZ6 487 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 PPP2R3CQ969Q6 453 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
CTSB-225ENST00000532409 PAAF1Q9BRP4 392 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 TMEM175Q9BSA9 504 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 TIPINQ9BVW5 301 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
CTSB-225ENST00000532409 FAN1Q9Y2M0 1017 aa17.06■□□□□ 0.32
CTSB-225ENST00000532409 A0A087X0B3 334 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 PTGESO14684 152 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 ALDH2P05091 517 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 MAPTP10636 758 aaKnown RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 GIT2Q14161 759 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 STK38Q15208 465 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 PDE12Q6L8Q7 609 aaKnown RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 TAS1R1Q7RTX1 841 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 DDX53Q86TM3 631 aaKnown RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 LINC00301Q8NCQ3 95 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 SPIRE2Q8WWL2 714 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 ADPGKQ9BRR6 497 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 NTPCRQ9BSD7 190 aaKnown RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
CTSB-225ENST00000532409 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 CDT1Q9H211 546 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 C17orf75Q9HAS0 396 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 PTPRHQ9HD43 1115 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 CD320Q9NPF0 282 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 KCND2Q9NZV8 630 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 TNFSF13BQ9Y275 285 aa17.05■□□□□ 0.32
CTSB-225ENST00000532409 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.04■□□□□ 0.32
CTSB-225ENST00000532409 ABLIM1O14639 778 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 CXCL14O95715 111 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 F13A1P00488 732 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 HARSP12081 509 aaKnown RBP17.04■□□□□ 0.32
CTSB-225ENST00000532409 OSTNP61366 133 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 GLRA4Q5JXX5 417 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
CTSB-225ENST00000532409 LARP4BQ92615 738 aaKnown RBP17.04■□□□□ 0.32
CTSB-225ENST00000532409 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 MSLNLQ96KJ4 702 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 B3GALT6Q96L58 329 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms