RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LPIN1Q14693 890 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 QPCTQ16769 361 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 TAS1R3Q7RTX0 852 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 FAM228AQ86W67 206 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 ADSSL1Q8N142 457 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 HPS3Q969F9 1004 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
COPB1-208ENST00000532088 DHTKD1Q96HY7 919 aaPredicted RBP13.72□□□□□ -0.21
COPB1-208ENST00000532088 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 WNT8AQ9H1J5 351 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 MINDY3Q9H8M7 445 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 ERVK-5Q9HDB9 667 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 ANO10Q9NW15 660 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 TBC1D7Q9P0N9 293 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 GDAQ9Y2T3 454 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 NOC2LQ9Y3T9 749 aaKnown RBP13.72□□□□□ -0.21
COPB1-208ENST00000532088 TSPAN1O60635 241 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 CCDC192P0DO97 292 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 RAG1P15918 1043 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 PAK2Q13177 524 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 PRPF4BQ13523 1007 aaKnown RBP13.71□□□□□ -0.21
COPB1-208ENST00000532088 MBTPS1Q14703 1052 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 STX1AQ16623 288 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 NFIL3Q16649 462 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
COPB1-208ENST00000532088 ZSCAN23Q3MJ62 389 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 ZC2HC1CQ53FD0 456 aaPredicted RBP13.71□□□□□ -0.21
COPB1-208ENST00000532088 PLEKHG4Q58EX7 1191 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 CATSPER4Q7RTX7 472 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 APBB1IPQ7Z5R6 666 aaPredicted RBP13.71□□□□□ -0.21
COPB1-208ENST00000532088 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 FTHL17Q9BXU8 183 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 FGFBP2Q9BYJ0 223 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
COPB1-208ENST00000532088 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.21
COPB1-208ENST00000532088 UMODL1Q5DID0 1318 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 A0A1B0GUA9 196 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 BIN1O00499 593 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 PDXKO00764 312 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 PSMA7O14818 248 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 N4BP3O15049 544 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 KIAA0391O15091 583 aaKnown RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 NBNO60934 754 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 CAVIN2O95810 425 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 GHRP10912 638 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 PROZP22891 400 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 ERCC5P28715 1186 aaPredicted RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 CYP2C18P33260 490 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 PRCPP42785 496 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 MYBPC2Q14324 1141 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 GPNMBQ14956 572 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 PPP2R2DQ66LE6 453 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 SLFN12LQ6IEE8 588 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 CENPPQ6IPU0 288 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 C12orf56Q8IXR9 622 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 C7orf61Q8IZ16 206 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 GLIS3Q8NEA6 775 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 SEPT8Q92599 483 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 ZNF668Q96K58 619 aaPredicted RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 ACO2Q99798 780 aaKnown RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 FUCA2Q9BTY2 467 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 KCTD10Q9H3F6 313 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 PTPRHQ9HD43 1115 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 TYW1Q9NV66 732 aaKnown RBP13.7□□□□□ -0.22
COPB1-208ENST00000532088 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 ST3GAL5Q9UNP4 418 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 TRAF3IP3Q9Y228 551 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 ZMYM2Q9UBW7 1377 aa13.7□□□□□ -0.22
COPB1-208ENST00000532088 CALUO43852 315 aaPredicted RBP13.69□□□□□ -0.22
COPB1-208ENST00000532088 TOM1L1O75674 476 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 PRPF6O94906 941 aaKnown RBP13.69□□□□□ -0.22
COPB1-208ENST00000532088 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
COPB1-208ENST00000532088 GARTP22102 1010 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 HOXA11P31270 313 aaPredicted RBP13.69□□□□□ -0.22
COPB1-208ENST00000532088 HOXD13P35453 343 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 LIG4P49917 911 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 KCNC4Q03721 635 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 LRRC63Q05C16 580 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 TYRO3Q06418 890 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.22
COPB1-208ENST00000532088 ATF7IP2Q5U623 682 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 SYCP3Q8IZU3 236 aa13.69□□□□□ -0.22
COPB1-208ENST00000532088 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms