RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ARL2P36404 184 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 CALCRLQ16602 461 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 IFNLR1Q8IU57 520 aaPredicted RBP20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 WASF1Q92558 559 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 RABGGTAQ92696 567 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 TRIM6Q9C030 488 aaPredicted RBP20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 TTC12Q9H892 705 aaPredicted RBP20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 MYH15Q9Y2K3 1946 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 NARSO43776 548 aaKnown RBP20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 DGAT1O75907 488 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 LYPLA2O95372 231 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 GLUD1P00367 558 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 CLCN5P51795 746 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 NCBP1Q09161 790 aaKnown RBP20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 PCBP1Q15365 356 aaKnown RBP eCLIP20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 ASCL5Q7RTU5 278 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 CMASQ8NFW8 434 aaPredicted RBP20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 PIGOQ8TEQ8 1089 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 RSAD2Q8WXG1 361 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 CCDC43Q96MW1 224 aaKnown RBP20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 RXFP1Q9HBX9 757 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 BRMS1Q9HCU9 246 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 ANKEF1Q9NU02 776 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 KLK14Q9P0G3 267 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 CACNG4Q9UBN1 327 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 DUSP12Q9UNI6 340 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 SSX2IPQ9Y2D8 614 aa20.47■□□□□ 0.87
SSSCA1-206ENST00000531405 BTBD18B2RXH4 712 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 PI15O43692 258 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 NPTXRO95502 500 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 NPR3P17342 541 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 GBP2P32456 591 aaPredicted RBP20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 TXKP42681 527 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 RARRES1P49788 294 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 DSG1Q02413 1049 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 POU5F1BQ06416 359 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 ME3Q16798 604 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 PALB2Q86YC2 1186 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 GLYCTKQ8IVS8 523 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 GSTCDQ8NEC7 633 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 GPR62Q9BZJ7 368 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 POLR3FQ9H1D9 316 aaPredicted RBP20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 FBXL21Q9UKT6 434 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 GIT1Q9Y2X7 761 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 CLUHO75153 1309 aa20.46■□□□□ 0.87
SSSCA1-206ENST00000531405 ZNF292O60281 2723 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 POTEMA6NI47 508 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 PROB1E7EW31 1015 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 NEMFO60524 1076 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 USO1O60763 962 aaKnown RBP20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 NR1I2O75469 434 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 MAEAQ7L5Y9 396 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 SIX5Q8N196 739 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 SMG7Q92540 1137 aaKnown RBP20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 GTF3C6Q969F1 213 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 COLEC11Q9BWP8 271 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 WDR6Q9NNW5 1121 aaKnown RBP20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 GPRC5CQ9NQ84 441 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 CHST7Q9NS84 486 aa20.45■□□□□ 0.86
SSSCA1-206ENST00000531405 JAK2O60674 1132 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 RPL17P18621 184 aaKnown RBP20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 NBL1P41271 181 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 ANKRD1Q15327 319 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 FUT10Q6P4F1 479 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 SLC27A1Q6PCB7 646 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 DIS3L2Q8IYB7 885 aaKnown RBP20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 HACE1Q8IYU2 909 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 ZNF707Q96C28 371 aaPredicted RBP20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 MTMR9Q96QG7 549 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 MYADMQ96S97 322 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 NFKBIZQ9BYH8 718 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 PARP2Q9UGN5 583 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 DCHS1Q96JQ0 3298 aa20.44■□□□□ 0.86
SSSCA1-206ENST00000531405 LRRIQ4A6NIV6 560 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 TGM5O43548 720 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 CFHP08603 1231 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 AOC1P19801 751 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 ELMSAN1Q6PJG2 1045 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 FRMD5Q7Z6J6 570 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 RIN2Q8WYP3 895 aaPredicted RBP20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 PAAF1Q9BRP4 392 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 TMEM60Q9H2L4 133 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 IGSF9Q9P2J2 1179 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 DPP7Q9UHL4 492 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 ADAM28Q9UKQ2 775 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 MIA3Q5JRA6 1907 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 DMXL1Q9Y485 3027 aa20.43■□□□□ 0.86
SSSCA1-206ENST00000531405 GVINP1Q7Z2Y8 2422 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 A0A1B0GUA9 196 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 PRR23AA6NEV1 266 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 ANAPC15P60006 121 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 GRIK3Q13003 919 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 USP41Q3LFD5 358 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 HASPINQ8TF76 798 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 STAMQ92783 540 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 PIDD1Q9HB75 910 aa20.42■□□□□ 0.86
SSSCA1-206ENST00000531405 NOTCH4Q99466 2003 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 TTLL13PA6NNM8 815 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 SPATA31C1P0DKV0 1188 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms