RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KCNG1Q9UIX4 513 aa15.73■□□□□ 0.11
CAPN1-216ENST00000528739 BARX2Q9UMQ3 279 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-216ENST00000528739 RBM19Q9Y4C8 960 aaKnown RBP15.73■□□□□ 0.11
CAPN1-216ENST00000528739 FSD2A1L4K1 749 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 GRXCR2A6NFK2 248 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 SPDYE4A6NLX3 237 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 TBX10O75333 385 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 FAM13AO94988 1023 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
CAPN1-216ENST00000528739 PLCG1P19174 1290 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 GUCY2CP25092 1073 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 LTBRP36941 435 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 SLC12A3P55017 1021 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 MCM6Q14566 821 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 STK38Q15208 465 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 CTC1Q2NKJ3 1217 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 DCAF4L1Q3SXM0 396 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 FOXD4L6Q3SYB3 417 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-216ENST00000528739 TMEM119Q4V9L6 283 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 EEF1DP3Q658K8 133 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 FOXD4L3Q6VB84 417 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-216ENST00000528739 ZBTB33Q86T24 672 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 DDX53Q86TM3 631 aaKnown RBP15.72■□□□□ 0.11
CAPN1-216ENST00000528739 MRPL43Q8N983 215 aaKnown RBP15.72■□□□□ 0.11
CAPN1-216ENST00000528739 COLEC11Q9BWP8 271 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
CAPN1-216ENST00000528739 CCDC113Q9H0I3 377 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 C17orf75Q9HAS0 396 aa15.72■□□□□ 0.11
CAPN1-216ENST00000528739 PHLPP2Q6ZVD8 1323 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 KIAA1671Q9BY89 1806 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 C2CD2LO14523 706 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 SLC26A4O43511 780 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 PLS3P13797 630 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 OSTNP61366 133 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 RBM10P98175 930 aaKnown RBP15.71■□□□□ 0.11
CAPN1-216ENST00000528739 ZNF568Q3ZCX4 644 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 NT5DC1Q5TFE4 455 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 KIAA1841Q6NSI8 718 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 COLGALT2Q8IYK4 626 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 DAW1Q8N136 415 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 MYCT1Q8N699 235 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 BCL7CQ8WUZ0 217 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-216ENST00000528739 RABGGTAQ92696 567 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 BICD1Q96G01 975 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 EPSTI1Q96J88 318 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 ZNF396Q96N95 335 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-216ENST00000528739 CLIC6Q96NY7 704 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 USP28Q96RU2 1077 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 APOL5Q9BWW9 433 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 TMEM134Q9H6X4 195 aa15.71■□□□□ 0.11
CAPN1-216ENST00000528739 LARSQ9P2J5 1176 aaKnown RBP15.71■□□□□ 0.11
CAPN1-216ENST00000528739 TCF20Q9UGU0 1960 aaKnown RBP15.71■□□□□ 0.1
CAPN1-216ENST00000528739 C2orf71A6NGG8 1288 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 MBTPS2O43462 519 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 B4GALT3O60512 393 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 TADA2AO75478 443 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 RECQL4O94761 1208 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 EDN1P05305 212 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 YARSP54577 528 aaKnown RBP15.7■□□□□ 0.1
CAPN1-216ENST00000528739 GRIK3Q13003 919 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 GIT2Q14161 759 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 COL19A1Q14993 1142 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 PTPAQ15257 358 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 LARP4BQ92615 738 aaKnown RBP15.7■□□□□ 0.1
CAPN1-216ENST00000528739 RAD54LQ92698 747 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 TARS2Q9BW92 718 aaKnown RBP15.7■□□□□ 0.1
CAPN1-216ENST00000528739 EMILIN2Q9BXX0 1053 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 PANK2Q9BZ23 570 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 ZBP1Q9H171 429 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 KCND2Q9NZV8 630 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 TFIP11Q9UBB9 837 aaKnown RBP15.7■□□□□ 0.1
CAPN1-216ENST00000528739 STK39Q9UEW8 545 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 TNFSF13BQ9Y275 285 aa15.7■□□□□ 0.1
CAPN1-216ENST00000528739 SRPRBQ9Y5M8 271 aaKnown RBP15.7■□□□□ 0.1
CAPN1-216ENST00000528739 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 TBCAO75347 108 aaKnown RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 GLP2RO95838 553 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 URODP06132 367 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 THP07101 528 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 CTSAP10619 480 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 KLRC2P26717 231 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 MAPK7Q13164 816 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 SMAD4Q13485 552 aaKnown RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 RRAGBQ5VZM2 374 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 FAM178BQ8IXR5 827 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 GJD3Q8N144 294 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 CASP10Q92851 521 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 ACO2Q99798 780 aaKnown RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 CCDC94Q9BW85 323 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 MRPL17Q9NRX2 175 aaKnown RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 CLEC1BQ9P126 229 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 FBXO2Q9UK22 296 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-216ENST00000528739 PLXNA4Q9HCM2 1894 aa15.69■□□□□ 0.1
CAPN1-216ENST00000528739 H0YCG3 227 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 CLASP2O75122 1294 aaKnown RBP15.68■□□□□ 0.1
CAPN1-216ENST00000528739 DDIT3P35638 169 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 ARSHQ5FYA8 562 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 USP49Q70CQ1 688 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms