RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ERVK-24P63145 666 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 PRKG1Q13976 671 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 PPP2R5AQ15172 486 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 STK38Q15208 465 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 LRRC41Q15345 812 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 NPY5RQ15761 445 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 ANO1Q5XXA6 986 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 HEATR6Q6AI08 1181 aaKnown RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 LHFPL2Q6ZUX7 228 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 APOBEC3FQ8IUX4 373 aaKnown RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 NOSTRINQ8IVI9 506 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 WDR75Q8IWA0 830 aaKnown RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 MRPL41Q8IXM3 137 aaKnown RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 PHACTR4Q8IZ21 702 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 ADGRF4Q8IZF3 695 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 SPICE1Q8N0Z3 855 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 PPM1KQ8N3J5 372 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 CXorf38Q8TB03 319 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 DCAF4Q8WV16 495 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 COA7Q96BR5 231 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 RRP36Q96EU6 259 aaKnown RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 LGR4Q9BXB1 951 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 GLIS2Q9BZE0 524 aaPredicted RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 SCAND2PQ9GZW5 306 aaPredicted RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 FOXP1Q9H334 677 aaPredicted RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 RIOX1Q9H6W3 641 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 JMJD4Q9H9V9 463 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 SEC63Q9UGP8 760 aaKnown RBP4.7□□□□□ -1.66
CD44-226ENST00000527889 RCOR1Q9UKL0 485 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 ELP1O95163 1332 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 SYNGAP1Q96PV0 1343 aa4.7□□□□□ -1.66
CD44-226ENST00000527889 ANK1P16157 1881 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CITO14578 2027 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 GOLGA6L4A6NEF3 574 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 TMEM232C9JQI7 657 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 F5H6K3 240 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SPTLC2O15270 562 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PRODHO43272 600 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 TBX1O43435 398 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PPP1R11O60927 126 aaPredicted RBP4.69□□□□□ -1.66
CD44-226ENST00000527889 LILRB5O75023 590 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 RASGRP1O95267 797 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SLFN14P0C7P3 912 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CPEP16870 476 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CALML3P27482 149 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 GNALP38405 381 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 ME1P48163 572 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 KLRC3Q07444 240 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 IKQ13123 557 aaPredicted RBP4.69□□□□□ -1.66
CD44-226ENST00000527889 SUZ12Q15022 739 aaKnown RBP4.69□□□□□ -1.66
CD44-226ENST00000527889 PTPAQ15257 358 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PCBP1Q15365 356 aaKnown RBP eCLIP4.69□□□□□ -1.66
CD44-226ENST00000527889 QRICH1Q2TAL8 776 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 ZSCAN23Q3MJ62 389 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 MAP9Q49MG5 647 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 FAM83BQ5T0W9 1011 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SYDE2Q5VT97 1194 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 DCAF15Q66K64 600 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SLC6A19Q695T7 634 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 ATL3Q6DD88 541 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CCSAPQ6IQ19 270 aaPredicted RBP4.69□□□□□ -1.66
CD44-226ENST00000527889 NSMFQ6X4W1 530 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PIK3AP1Q6ZUJ8 805 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 NECAB2Q7Z6G3 386 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 HID1Q8IV36 788 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 BLIDQ8IZY5 108 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 AHI1Q8N157 1196 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 FSIP1Q8NA03 581 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 KLHL23Q8NBE8 558 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 LINC00301Q8NCQ3 95 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 LRRN4CLQ8ND94 238 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 GMCL1P1Q8NEA9 526 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CCDC148Q8NFR7 591 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SLC7A14Q8TBB6 771 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 BAHD1Q8TBE0 780 aaPredicted RBP4.69□□□□□ -1.66
CD44-226ENST00000527889 BICD2Q8TD16 824 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CCDC74BQ96LY2 380 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 FGD4Q96M96 766 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 ZNF341Q9BYN7 854 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 GOLPH3LQ9H4A5 285 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 FBRSQ9HAH7 460 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 JADE2Q9NQC1 790 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SH3GLB2Q9NR46 395 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 ADARB2Q9NS39 739 aaKnown RBP4.69□□□□□ -1.66
CD44-226ENST00000527889 BARHL2Q9NY43 387 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 RTEL1Q9NZ71 1219 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 SFMBT1Q9UHJ3 866 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 CFAP45Q9UL16 551 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PCDHA7Q9UN72 937 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 TMX2Q9Y320 296 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PCDHB6Q9Y5E3 794 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 COMMD10Q9Y6G5 202 aa4.69□□□□□ -1.66
CD44-226ENST00000527889 PIEZO1Q92508 2521 aa4.68□□□□□ -1.66
CD44-226ENST00000527889 A0A1B0GVL5 298 aa4.68□□□□□ -1.66
CD44-226ENST00000527889 SYCE3A1L190 88 aa4.68□□□□□ -1.66
CD44-226ENST00000527889 SMCO2A6NFE2 343 aa4.68□□□□□ -1.66
CD44-226ENST00000527889 TRIM75PA6NK02 468 aa4.68□□□□□ -1.66
CD44-226ENST00000527889 TMPRSS2O15393 492 aa4.68□□□□□ -1.66
CD44-226ENST00000527889 CTNND1O60716 968 aaKnown RBP4.68□□□□□ -1.66
CD44-226ENST00000527889 ADAM11O75078 769 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms