RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SPATA31C1P0DKV0 1188 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 MYBP10242 640 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 GLUD2P49448 558 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 GNL2Q13823 731 aaKnown RBP24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 ELMSAN1Q6PJG2 1045 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 CCDC149Q6ZUS6 474 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 CCDC83Q8IWF9 413 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 MCPH1Q8NEM0 835 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 ERMNQ8TAM6 284 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 HERC2P3Q9BVR0 1158 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 DPP7Q9UHL4 492 aa24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 TDRD15B5MCY1 1934 aaKnown RBP24.8■■□□□ 1.56
TRAPPC4-208ENST00000527680 A0A1B0GUA9 196 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 INPPL1O15357 1258 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 SEC24BO95487 1268 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 DSC1Q08554 894 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 OTOP3Q7RTS5 596 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 ZBTB8OSQ8IWT0 167 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 FEZF2Q8TBJ5 459 aa24.79■■□□□ 1.56
TRAPPC4-208ENST00000527680 TEX28O15482 410 aa24.78■■□□□ 1.56
TRAPPC4-208ENST00000527680 MED24O75448 989 aa24.78■■□□□ 1.56
TRAPPC4-208ENST00000527680 KIAA0319Q5VV43 1072 aa24.78■■□□□ 1.56
TRAPPC4-208ENST00000527680 SMOC2Q9H3U7 446 aa24.78■■□□□ 1.56
TRAPPC4-208ENST00000527680 MAN1C1Q9NR34 630 aa24.78■■□□□ 1.56
TRAPPC4-208ENST00000527680 PRMT7Q9NVM4 692 aaPredicted RBP24.78■■□□□ 1.56
TRAPPC4-208ENST00000527680 CCDC195A0A1B0GUA6 201 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 F8W810 466 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 TADA2AO75478 443 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 GLUD1P00367 558 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 LIG1P18858 919 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 ST3GAL1Q11201 340 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 PALB2Q86YC2 1186 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 PHOX2BQ99453 314 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 POLR3CQ9BUI4 534 aaPredicted RBP24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 MFSD1Q9H3U5 465 aa24.77■■□□□ 1.56
TRAPPC4-208ENST00000527680 ARHGEF35A5YM69 484 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 OR52Z1P0C646 297 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 SPATA31D3P0C874 917 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 TCF15Q12870 199 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 PADI6Q6TGC4 694 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 C15orf39Q6ZRI6 1047 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 SPATA31D4Q6ZUB0 917 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 FAM184AQ8NB25 1140 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 RABGGTAQ92696 567 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 B3GALT6Q96L58 329 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 PRIMPOLQ96LW4 560 aa24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 LLPHQ9BRT6 129 aaKnown RBP24.76■■□□□ 1.55
TRAPPC4-208ENST00000527680 RPA1P27694 616 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 DSG1Q02413 1049 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 GRIK3Q13003 919 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 USP41Q3LFD5 358 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 FUT10Q6P4F1 479 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 POTEGQ6S5H5 508 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 GLYCTKQ8IVS8 523 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 GSTCDQ8NEC7 633 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 GPR62Q9BZJ7 368 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 IRF2BPLQ9H1B7 796 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 C2orf40Q9H1Z8 148 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 FOXP1Q9H334 677 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 RXFP1Q9HBX9 757 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 ADAM28Q9UKQ2 775 aa24.75■■□□□ 1.55
TRAPPC4-208ENST00000527680 RBM25P49756 843 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 PRPF4BQ13523 1007 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 MAPK6Q16659 721 aa24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 DEPTORQ8TB45 409 aa24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 RIN2Q8WYP3 895 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 ATOH1Q92858 354 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 FZD8Q9H461 694 aa24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 PIDD1Q9HB75 910 aa24.74■■□□□ 1.55
TRAPPC4-208ENST00000527680 KMT2EQ8IZD2 1858 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 N4BP3O15049 544 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 CYP11B2P19099 503 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 GBP2P32456 591 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 ORC2Q13416 577 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 TTC38Q5R3I4 469 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 PPP4R3CPQ6ZMV5 832 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 RNF168Q8IYW5 571 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 CMASQ8NFW8 434 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 ZSCAN31Q96LW9 406 aaPredicted RBP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 ADPGKQ9BRR6 497 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 CHST7Q9NS84 486 aa24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 NOL7Q9UMY1 257 aaKnown RBP24.73■■□□□ 1.55
TRAPPC4-208ENST00000527680 RFPL2O75678 378 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 EFEMP2O95967 443 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 CCT6AP40227 531 aaKnown RBP24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 HMGN5P82970 282 aaKnown RBP24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 TDGQ13569 410 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 FAM187BQ17R55 369 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 HAUS3Q68CZ6 603 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 CDCA2Q69YH5 1023 aaPredicted RBP24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 FBXO18Q8NFZ0 1043 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 SMG7Q92540 1137 aaKnown RBP24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 STAMQ92783 540 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 POLD4Q9HCU8 107 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 FAM86C1Q9NVL1 165 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 SNTG2Q9NY99 539 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 CACNG4Q9UBN1 327 aa24.72■■□□□ 1.55
TRAPPC4-208ENST00000527680 C2orf16Q68DN1 1984 aa24.71■■□□□ 1.55
TRAPPC4-208ENST00000527680 H0Y858 1186 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms