RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PJA2O43164 708 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 GFPT2O94808 682 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 LGALS2P05162 132 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 FAM228BP0C875 321 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 SRGAP2CP0DJJ0 459 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 ACVR2BQ13705 512 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 ZNF484Q5JVG2 852 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 ZNF571Q7Z3V5 609 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 SAPCD2Q86UD0 394 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 LRRC71Q8N4P6 559 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 AFG1LQ8WV93 481 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 HNRNPLLQ8WVV9 542 aaKnown RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 TARS2Q9BW92 718 aaKnown RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 RNPEPQ9H4A4 650 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 UBE2TQ9NPD8 197 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 SUCLA2Q9P2R7 463 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 PPFIA4O75335 1185 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 INHBEP58166 350 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 CHMP4BP1P59074 171 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 MAP2K1Q02750 393 aaPredicted RBP17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 TFDP1Q14186 410 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 IQSEC1Q6DN90 963 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 RNF149Q8NC42 400 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 UBXN6Q9BZV1 441 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 C2orf40Q9H1Z8 148 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 TACC1O75410 805 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 DLATP10515 647 aaKnown RBP17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 ARHGAP44Q17R89 818 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 DUSP28Q4G0W2 176 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 EFCAB12Q6NXP0 572 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 ZPBP2Q6X784 338 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 RHPN2Q8IUC4 686 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 METTL13Q8N6R0 699 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 TRIM58Q8NG06 486 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 NPLOC4Q8TAT6 608 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 TRAPPC12Q8WVT3 735 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 POP1Q99575 1024 aaKnown RBP17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 ANKFY1Q9P2R3 1169 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 USP20Q9Y2K6 914 aa17.55■□□□□ 0.4
SNRNP35-204ENST00000527158 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 ASAP2O43150 1006 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 EVI5O60447 810 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 ERLIN1O75477 346 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 MAPK6Q16659 721 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 WHAMMP3Q1A5X7 153 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 CDCA2Q69YH5 1023 aaPredicted RBP17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 FNBP1Q96RU3 617 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 MSTO1Q9BUK6 570 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 MRPL4Q9BYD3 311 aaKnown RBP17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 PARD6BQ9BYG5 372 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 COQ4Q9Y3A0 265 aa17.54■□□□□ 0.4
SNRNP35-204ENST00000527158 A0A0B4J269 797 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 INSRRP14616 1297 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 SMPD1P17405 629 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 MAP2K5Q13163 448 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 GPS2Q13227 327 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 RNF10Q8N5U6 811 aaKnown RBP17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 FBXL13Q8NEE6 735 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 ALS2CR12Q96Q35 445 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 ADGRA2Q96PE1 1338 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 MAGEB2O15479 319 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 ACOT2P49753 483 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 IGBP1P78318 339 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 PSMD6Q15008 389 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 MORN1Q5T089 497 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 IFNL1Q8IU54 200 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 ZBTB45Q96K62 511 aaPredicted RBP17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 GPR88Q9GZN0 384 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 TRPM7Q96QT4 1865 aa17.53■□□□□ 0.4
SNRNP35-204ENST00000527158 CLDN3O15551 220 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 TBC1D8O95759 1140 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 GPC3P51654 580 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 NAP1L1P55209 391 aaKnown RBP17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 NLRP11P59045 1033 aaKnown RBP17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 NAB2Q15742 525 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 KIAA0753Q2KHM9 967 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 SV2AQ7L0J3 742 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 ARHGEF19Q8IW93 802 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 OR6J1Q8NGC5 347 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 NOX5Q96PH1 765 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 TCHPQ9BT92 498 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 CCDC113Q9H0I3 377 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 RAB20Q9NX57 234 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 CALCOCO1Q9P1Z2 691 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 NAGPAQ9UK23 515 aa17.52■□□□□ 0.4
SNRNP35-204ENST00000527158 ANO9A1A5B4 782 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 FOXN3O00409 490 aaPredicted RBP17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 MSCO60682 206 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 TOM1L1O75674 476 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 C22orf31O95567 290 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 PRKCBP05771 671 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 SLC10A3P09131 477 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 ZNF286BP0CG31 522 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 TNNI1P19237 187 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 CYP2C19P33261 490 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 MFAP3P55082 362 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 CLDN10P78369 228 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 ALKBH5Q6P6C2 394 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms