RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 OR1G1P47890 313 aa15.92■□□□□ 0.14
CPSF1-201ENST00000526271 NR5A1Q13285 461 aa15.92■□□□□ 0.14
CPSF1-201ENST00000526271 BMS1Q14692 1282 aaKnown RBP15.92■□□□□ 0.14
CPSF1-201ENST00000526271 ANGPT1Q15389 498 aa15.92■□□□□ 0.14
CPSF1-201ENST00000526271 POTEHQ6S545 545 aa15.92■□□□□ 0.14
CPSF1-201ENST00000526271 HSD17B14Q9BPX1 270 aa15.92■□□□□ 0.14
CPSF1-201ENST00000526271 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
CPSF1-201ENST00000526271 TBX3O15119 743 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 TGM5O43548 720 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 CCNT1O60563 726 aaKnown RBP15.91■□□□□ 0.14
CPSF1-201ENST00000526271 URODP06132 367 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 GLULP15104 373 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 AKAP5P24588 427 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 GLUD2P49448 558 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 XKR9Q5GH70 373 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 RTP2Q5QGT7 225 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 NCAPH2Q6IBW4 605 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 ADSSL1Q8N142 457 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 NKD2Q969F2 451 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-201ENST00000526271 ACSF2Q96CM8 615 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-201ENST00000526271 JPH2Q9BR39 696 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-201ENST00000526271 TM6SF1Q9BZW5 370 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 NT5C3AQ9H0P0 336 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 MFSD1Q9H3U5 465 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 IGSF9Q9P2J2 1179 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 KANSL3Q9P2N6 904 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 PATJQ8NI35 1801 aa15.91■□□□□ 0.14
CPSF1-201ENST00000526271 CARNS1A5YM72 827 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 POTEMA6NI47 508 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 ANHXE9PGG2 379 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 ADAM12O43184 909 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 LARGE1O95461 756 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 GLUD1P00367 558 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 NAB2Q15742 525 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 FUT10Q6P4F1 479 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 PRSS55Q6UWB4 352 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-201ENST00000526271 PALB2Q86YC2 1186 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 GLYCTKQ8IVS8 523 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-201ENST00000526271 TMEM87AQ8NBN3 555 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 GPR152Q8TDT2 470 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 FAM193BQ96PV7 902 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-201ENST00000526271 MTRQ99707 1265 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 APOL6Q9BWW8 343 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 GPRC5CQ9NQ84 441 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 KLK14Q9P0G3 267 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 CA14Q9ULX7 337 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 USP20Q9Y2K6 914 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 PPME1Q9Y570 386 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 CYP46A1Q9Y6A2 500 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 STK36Q9NRP7 1315 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 MIA3Q5JRA6 1907 aa15.9■□□□□ 0.14
CPSF1-201ENST00000526271 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 CPLX1O14810 134 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 LRRN2O75325 713 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 LYPLA2O95372 231 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
CPSF1-201ENST00000526271 NTHL1P78549 312 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 HTR4Q13639 388 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 MAML2Q8IZL2 1156 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-201ENST00000526271 SMG7Q92540 1137 aaKnown RBP15.89■□□□□ 0.13
CPSF1-201ENST00000526271 EIF2AK1Q9BQI3 630 aaKnown RBP15.89■□□□□ 0.13
CPSF1-201ENST00000526271 SLKQ9H2G2 1235 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-201ENST00000526271 ZSWIM4Q9H7M6 989 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 TBC1D17Q9HA65 648 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 WNT16Q9UBV4 365 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 SPTBN2O15020 2390 aa15.89■□□□□ 0.13
CPSF1-201ENST00000526271 INO80B-WBP1J3KQ70 363 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 PTGESO14684 152 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 ASAP2O43150 1006 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 PFKFB2O60825 505 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 REC8O95072 547 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 ADH1AP07327 375 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 LAMP2P13473 410 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 GBP2P32456 591 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-201ENST00000526271 RARRES1P49788 294 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 ST3GAL1Q11201 340 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 CD300LGQ6UXG3 332 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 TPH2Q8IWU9 490 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 CNNM3Q8NE01 707 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 TCP11Q8WWU5 503 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 PDRG1Q9NUG6 133 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 FBXL21Q9UKT6 434 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 GIT1Q9Y2X7 761 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 R4GN57 208 aa15.88■□□□□ 0.13
CPSF1-201ENST00000526271 A0A1B0GUA9 196 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 GAS2O43903 313 aaKnown RBP15.87■□□□□ 0.13
CPSF1-201ENST00000526271 ERLIN2O94905 339 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 NPTXRO95502 500 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
CPSF1-201ENST00000526271 SPATA31C1P0DKV0 1188 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 SRFP11831 508 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 AXLP30530 894 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 POU5F1BQ06416 359 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 NOTUMQ6P988 496 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 PIGOQ8TEQ8 1089 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 RIN2Q8WYP3 895 aaPredicted RBP15.87■□□□□ 0.13
CPSF1-201ENST00000526271 FGF14Q92915 247 aa15.87■□□□□ 0.13
CPSF1-201ENST00000526271 CCDC51Q96ER9 411 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms