RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 YIPF3Q9GZM5 350 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 AGPAT3Q9NRZ7 376 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 MAST2Q6P0Q8 1798 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 TMEM150BA6NC51 233 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 hCG_1984214I3L0E3 225 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 O00370 1275 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 NOVP48745 357 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 SLFN13Q68D06 897 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 RNF207Q6ZRF8 634 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 FAM178BQ8IXR5 827 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ZNF713Q8N859 430 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ERMNQ8TAM6 284 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 TARSP26639 723 aaKnown RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 CHRNA3P32297 505 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 MSH2P43246 934 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 PEX5P50542 639 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ZNF268Q14587 947 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 SEL1L2Q5TEA6 688 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 CYP4F22Q6NT55 531 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ZNF449Q6P9G9 518 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 SPATA21Q7Z572 469 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 NOP9Q86U38 636 aaKnown RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 SLFN12Q8IYM2 578 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 UBL4BQ8N7F7 174 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 NUP85Q9BW27 656 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ETNK1Q9HBU6 452 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 SLCO1B3Q9NPD5 702 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 GGA1Q9UJY5 639 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 VAV3Q9UKW4 847 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 INTUQ9ULD6 942 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ZBTB21Q9ULJ3 1066 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 FRMD4BQ9Y2L6 1034 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 FOXN2P32314 431 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 ABL2P42684 1182 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 ERFP50548 548 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 LRCH2Q5VUJ6 765 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 SLC13A5Q86YT5 568 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 DHX38Q92620 1227 aaKnown RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 NAP1L3Q99457 506 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 CBWD1Q9BRT8 395 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 NOP53Q9NZM5 478 aaKnown RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 SUN1O94901 812 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 SLITRK3O94933 977 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 PDHA1P08559 390 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 RARGP13631 454 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 CTNNA2P26232 953 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 STX2P32856 288 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 CALCOCO2Q13137 446 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 ECHDC2Q86YB7 292 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 PPM1KQ8N3J5 372 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 P3H4Q92791 437 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 ART4Q93070 314 aa14.12□□□□□ -0.15
CAPN1-202ENST00000524773 UTP4Q969X6 686 aaKnown RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 NSRP1Q9H0G5 558 aaKnown RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 R3HDM2Q9Y2K5 976 aaKnown RBP14.12□□□□□ -0.15
CAPN1-202ENST00000524773 MAP3K13O43283 966 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 CFBP00751 764 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 OAS1P00973 400 aaKnown RBP14.11□□□□□ -0.15
CAPN1-202ENST00000524773 BNIP1Q12981 228 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 DNAJC3Q13217 504 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 SIX1Q15475 284 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-202ENST00000524773 ANKRD20A2Q5SQ80 823 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 ANKRD20A1Q5TYW2 823 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 ANKRD20A3Q5VUR7 823 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 WDR18Q9BV38 432 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 HAO1Q9UJM8 370 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.11□□□□□ -0.15
CAPN1-202ENST00000524773 SLC16A3O15427 465 aaKnown RBP14.11□□□□□ -0.15
CAPN1-202ENST00000524773 GSTA1P08263 222 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 ITGA8P53708 1063 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 GPC5P78333 572 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 GALNTL6Q49A17 601 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 TAOK1Q7L7X3 1001 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 CCDC127Q96BQ5 260 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 PARVGQ9HBI0 331 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 KLHL11Q9NVR0 708 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 SYNGAP1Q96PV0 1343 aa14.11□□□□□ -0.15
CAPN1-202ENST00000524773 THAP12O43422 761 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 ECEL1O95672 775 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 HS2ST1Q7LGA3 356 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 LMO3Q8TAP4 145 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 TBC1D16Q8TBP0 767 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 ZNF564Q8TBZ8 553 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 PLEKHO2Q8TD55 490 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 ZNF653Q96CK0 615 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 FIZ1Q96SL8 496 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 HOMER3Q9NSC5 361 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 PCYOX1Q9UHG3 505 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 EYA4O95677 639 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 BFSP1Q12934 665 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 TMED2Q15363 201 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 GPATCH4Q5T3I0 446 aaKnown RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 C1orf186Q6ZWK4 172 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 ZNF720Q7Z2F6 126 aa14.1□□□□□ -0.15
CAPN1-202ENST00000524773 TAB3Q8N5C8 712 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-202ENST00000524773 SLC5A5Q92911 643 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms