RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 LYNP07948 512 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TMEM253P0C7T8 217 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 BCRP11274 1271 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 KCNA3P22001 575 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 GTF2H1P32780 548 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SLC34A1Q06495 639 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 APOFQ13790 326 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 LRRC14Q15048 493 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SYDE1Q6ZW31 735 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 RNF41Q9H4P4 317 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PPCSQ9HAB8 311 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 STOML1Q9UBI4 398 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 AMACRQ9UHK6 382 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SLC4A4Q9Y6R1 1079 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TTI1O43156 1089 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 EDF1O60869 148 aaKnown RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 VARSP26640 1264 aaKnown RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 CHRNA3P32297 505 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 UBAP2Q5T6F2 1119 aaKnown RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 SFMBT2Q5VUG0 894 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 TSHZ1Q6ZSZ6 1077 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ZNF571Q7Z3V5 609 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 NAPBQ9H115 298 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 C1orf21Q9H246 121 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 SIPA1L1O43166 1804 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 TRIM64A6NGJ6 449 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 VILLO15195 856 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ITGA4P13612 1032 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ADSSP30520 456 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 FOXN2P32314 431 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 GRIA2P42262 883 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 MAP7Q14244 749 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 LRRC8CQ8TDW0 803 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ZNF496Q96IT1 587 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 PRICKLE1Q96MT3 831 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 RIOK1Q9BRS2 568 aaKnown RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 TUBB6Q9BUF5 446 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ASCC2Q9H1I8 757 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 hCG_1642624A0A1W2PR95 340 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 FAM200BP0CF97 657 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 GSTM4Q03013 218 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 PDE4DQ08499 809 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 PDK4Q16654 411 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 SLC35G1Q2M3R5 365 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 Q6ZNX1 250 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 MZB1Q8WU39 189 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 NAT14Q8WUY8 206 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ARHGEF2Q92974 986 aaKnown RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 OLFM3Q96PB7 478 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 PNMA5Q96PV4 448 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 PACSIN1Q9BY11 444 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 TAOK3Q9H2K8 898 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 LARSQ9P2J5 1176 aaKnown RBP8.97□□□□□ -0.97
CSMD1-213ENST00000523488 TRAF3IP3Q9Y228 551 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 PCDHA8Q9Y5H6 950 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 ZMYM2Q9UBW7 1377 aa8.97□□□□□ -0.97
CSMD1-213ENST00000523488 A0A0J9YVX5 310 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 CAPN14A8MX76 684 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 DDX3XO00571 662 aaKnown RBP eCLIP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 TYROBPO43914 113 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 RAD21O60216 631 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 TMCC1O94876 653 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 SPATA31D3P0C874 917 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 SCG2P13521 617 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 CALML3P27482 149 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 CACNA2D1P54289 1103 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 GRB10Q13322 594 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 AGMOQ6ZNB7 445 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 SPATA31D4Q6ZUB0 917 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 JAMLQ86YT9 394 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ABTB1Q969K4 478 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 OXCT2Q9BYC2 517 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 IQCGQ9H095 443 aaKnown RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 PREBQ9HCU5 417 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ERVK-5Q9HDB9 667 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ATRNL1Q5VV63 1379 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 DCTN3O75935 186 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ITGA2BP08514 1039 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 DHRS4L1P0CG22 281 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 IGHMBP2P38935 993 aaKnown RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 BPIFB4P59827 614 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ASIC1P78348 528 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 PFKPQ01813 784 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 LRRC74BQ6ZQY2 392 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 MFSD6Q6ZSS7 791 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 RBM46Q8TBY0 533 aaKnown RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 LENG1Q96BZ8 264 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 HIC2Q96JB3 615 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ZSCAN10Q96SZ4 725 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 ZNF184Q99676 751 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-213ENST00000523488 FOXP3Q9BZS1 431 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.97
CSMD1-213ENST00000523488 MYH14Q7Z406 1995 aaKnown RBP8.96□□□□□ -0.98
CSMD1-213ENST00000523488 SORBS3O60504 671 aa8.96□□□□□ -0.98
CSMD1-213ENST00000523488 ATP5DP30049 168 aa8.96□□□□□ -0.98
CSMD1-213ENST00000523488 STX2P32856 288 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms