RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KLK14Q9P0G3 267 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 RPL17P18621 184 aaKnown RBP28.85■■■□□ 2.21
PVT1-219ENST00000523427 ID4P47928 161 aa28.85■■■□□ 2.21
PVT1-219ENST00000523427 DSC1Q08554 894 aa28.85■■■□□ 2.21
PVT1-219ENST00000523427 ZNF707Q96C28 371 aaPredicted RBP28.85■■■□□ 2.21
PVT1-219ENST00000523427 GPR62Q9BZJ7 368 aa28.85■■■□□ 2.21
PVT1-219ENST00000523427 NXF3Q9H4D5 531 aaKnown RBP28.85■■■□□ 2.21
PVT1-219ENST00000523427 TBC1D17Q9HA65 648 aa28.85■■■□□ 2.21
PVT1-219ENST00000523427 XPNPEP1Q9NQW7 623 aa28.85■■■□□ 2.21
PVT1-219ENST00000523427 EP300Q09472 2414 aaPredicted RBP28.84■■■□□ 2.21
PVT1-219ENST00000523427 AXLP30530 894 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 TFDP1Q14186 410 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 MXD4Q14582 209 aaPredicted RBP28.84■■■□□ 2.21
PVT1-219ENST00000523427 RNF168Q8IYW5 571 aaPredicted RBP28.84■■■□□ 2.21
PVT1-219ENST00000523427 GPR152Q8TDT2 470 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 ASAP3Q8TDY4 903 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 NT5C3AQ9H0P0 336 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 PDRG1Q9NUG6 133 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 EPS15L1Q9UBC2 864 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 R4GN57 208 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 WDR87Q6ZQQ6 2873 aa28.84■■■□□ 2.21
PVT1-219ENST00000523427 TGM5O43548 720 aa28.83■■■□□ 2.21
PVT1-219ENST00000523427 BAG4O95429 457 aaKnown RBP28.83■■■□□ 2.21
PVT1-219ENST00000523427 FUT10Q6P4F1 479 aa28.83■■■□□ 2.21
PVT1-219ENST00000523427 CYP26C1Q6V0L0 522 aa28.83■■■□□ 2.21
PVT1-219ENST00000523427 FAM177A1Q8N128 213 aaPredicted RBP28.83■■■□□ 2.21
PVT1-219ENST00000523427 CCDC51Q96ER9 411 aa28.83■■■□□ 2.21
PVT1-219ENST00000523427 CACNG4Q9UBN1 327 aa28.83■■■□□ 2.21
PVT1-219ENST00000523427 PARP2Q9UGN5 583 aa28.83■■■□□ 2.21
PVT1-219ENST00000523427 A0A087WWV3 80 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 FAM205CA6NFA0 338 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 TBX3O15119 743 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 B4GALT5O43286 388 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 SLITRK3O94933 977 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 NPTXRO95502 500 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 EFEMP2O95967 443 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 DCNP07585 359 aaKnown RBP28.82■■■□□ 2.2
PVT1-219ENST00000523427 SRFP11831 508 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 XBP1P17861 261 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 ARF4P18085 180 aaPredicted RBP28.82■■■□□ 2.2
PVT1-219ENST00000523427 MBTD1Q05BQ5 628 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 EARS2Q5JPH6 523 aaKnown RBP28.82■■■□□ 2.2
PVT1-219ENST00000523427 HACE1Q8IYU2 909 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 CCDC43Q96MW1 224 aaKnown RBP28.82■■■□□ 2.2
PVT1-219ENST00000523427 CHST7Q9NS84 486 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 GIT1Q9Y2X7 761 aa28.82■■■□□ 2.2
PVT1-219ENST00000523427 CDKL5O76039 1030 aa28.81■■■□□ 2.2
PVT1-219ENST00000523427 SCRN1Q12765 414 aa28.81■■■□□ 2.2
PVT1-219ENST00000523427 CAPSQ13938 189 aa28.81■■■□□ 2.2
PVT1-219ENST00000523427 USP41Q3LFD5 358 aa28.81■■■□□ 2.2
PVT1-219ENST00000523427 NAP1L4Q99733 375 aaKnown RBP28.81■■■□□ 2.2
PVT1-219ENST00000523427 EIF2AK1Q9BQI3 630 aaKnown RBP28.81■■■□□ 2.2
PVT1-219ENST00000523427 PLEKHA4Q9H4M7 779 aa28.81■■■□□ 2.2
PVT1-219ENST00000523427 TADA2AO75478 443 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 LAMP2P13473 410 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 SPIRE1Q08AE8 756 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 AMHR2Q16671 573 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 PRSS55Q6UWB4 352 aaPredicted RBP28.8■■■□□ 2.2
PVT1-219ENST00000523427 SLFN12Q8IYM2 578 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 PRKD2Q9BZL6 878 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 ADAM28Q9UKQ2 775 aa28.8■■■□□ 2.2
PVT1-219ENST00000523427 PCBP1Q15365 356 aaKnown RBP eCLIP28.79■■■□□ 2.2
PVT1-219ENST00000523427 POTEGQ6S5H5 508 aa28.79■■■□□ 2.2
PVT1-219ENST00000523427 MAEAQ7L5Y9 396 aa28.79■■■□□ 2.2
PVT1-219ENST00000523427 GSTCDQ8NEC7 633 aa28.79■■■□□ 2.2
PVT1-219ENST00000523427 HASPINQ8TF76 798 aa28.79■■■□□ 2.2
PVT1-219ENST00000523427 HDAC7Q8WUI4 952 aa28.79■■■□□ 2.2
PVT1-219ENST00000523427 RHOBTB2Q9BYZ6 727 aa28.79■■■□□ 2.2
PVT1-219ENST00000523427 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.79■■■□□ 2.2
PVT1-219ENST00000523427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.79■■■□□ 2.26e-7■■■■□ 24.2
PVT1-219ENST00000523427 GLRA2P23416 452 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 NR5A1Q13285 461 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 NXPE3Q969Y0 559 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 TM6SF1Q9BZW5 370 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 ARHGEF3Q9NR81 526 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 ZDHHC7Q9NXF8 308 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 SIT1Q9Y3P8 196 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 NUMBLQ9Y6R0 609 aa28.78■■■□□ 2.2
PVT1-219ENST00000523427 LMNAP02545 664 aaKnown RBP28.77■■■□□ 2.2
PVT1-219ENST00000523427 ARL2P36404 184 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 LILRA6Q6PI73 481 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 CEP57Q86XR8 500 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 PIGOQ8TEQ8 1089 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 HINFPQ9BQA5 517 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 PAAF1Q9BRP4 392 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 POLR3FQ9H1D9 316 aaPredicted RBP28.77■■■□□ 2.2
PVT1-219ENST00000523427 PCDHA12Q9UN75 941 aa28.77■■■□□ 2.2
PVT1-219ENST00000523427 TDRD15B5MCY1 1934 aaKnown RBP28.77■■■□□ 2.2
PVT1-219ENST00000523427 DGAT1O75907 488 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 FSHRP23945 695 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 NTHL1P78549 312 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 GRIK3Q13003 919 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 HTR4Q13639 388 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 RTP2Q5QGT7 225 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 SLC27A1Q6PCB7 646 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 DCLRE1AQ6PJP8 1040 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 ERMP1Q7Z2K6 904 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 GRASPQ7Z6J2 395 aaPredicted RBP28.76■■■□□ 2.19
PVT1-219ENST00000523427 IFNLR1Q8IU57 520 aaPredicted RBP28.76■■■□□ 2.19
PVT1-219ENST00000523427 RPP25Q9BUL9 199 aaKnown RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms