RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 USP14P54578 494 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 RIN1Q13671 783 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 GBX1Q14549 363 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 PGS1Q32NB8 556 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 SWSAP1Q6NVH7 229 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 PQLC1Q8N2U9 271 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 OR7D4Q8NG98 312 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 NSUN6Q8TEA1 469 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 HDAC10Q969S8 669 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 LRRC37BQ96QE4 947 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 BCO1Q9HAY6 547 aa5.92□□□□□ -1.46
CTNNA1-238ENST00000523298 SLC26A4O43511 780 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 PRICKLE3O43900 615 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 WNT3AP56704 352 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 ZNF280AP59817 542 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 GFOD2Q3B7J2 385 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 MINDY4Q4G0A6 757 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 DGKHQ86XP1 1220 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 IFI44Q8TCB0 444 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 CCHCR1Q8TD31 782 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 RABGGTAQ92696 567 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 TOX2Q96NM4 488 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 MAP3K14Q99558 947 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 CGRRF1Q99675 332 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 MYOCQ99972 504 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 C7orf25Q9BPX7 421 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 IL23AQ9NPF7 189 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 CHST12Q9NRB3 414 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 PPP4R1LQ9P1A2 415 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 SAP30BPQ9UHR5 308 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 AJAP1Q9UKB5 411 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 ACTL7AQ9Y615 435 aa5.91□□□□□ -1.46
CTNNA1-238ENST00000523298 UBE2QL1A1L167 161 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 UBXN7O94888 489 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 JUNP05412 331 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 VCAM1P19320 739 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 CNR2P34972 360 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 EPHB4P54760 987 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 PPP2CBP62714 309 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 PPP2CAP67775 309 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 MTM1Q13496 603 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 LLGL1Q15334 1064 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 MAP9Q49MG5 647 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 ARHGAP29Q52LW3 1261 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 CCDC181Q5TID7 509 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 ANKS6Q68DC2 871 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 CMTM4Q8IZR5 234 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 SHCBP1Q8NEM2 672 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 SLC35B2Q8TB61 432 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 LPPQ93052 612 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 SAMD11Q96NU1 681 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 NT5C1BQ96P26 610 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 VRK1Q99986 396 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 SSBP3Q9BWW4 388 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 NCDNQ9UBB6 729 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 SLC23A1Q9UHI7 598 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 OAZ3Q9UMX2 235 aa5.9□□□□□ -1.46
CTNNA1-238ENST00000523298 FAM171A2A8MVW0 826 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 PRC1O43663 620 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 B3GALT2O43825 422 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 CTNND1O60716 968 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 PHF2O75151 1096 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 TUSC2O75896 110 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 MAP4K4O95819 1239 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 SBK3P0C264 359 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 ALOX15P16050 662 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 CRHR1P34998 444 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 ALDH1A3P47895 512 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 CDC42EP1Q00587 391 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 DUSP2Q05923 314 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 KIAA2012Q0VF49 1180 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 GAGE13Q4V321 117 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 MIGA2Q7L4E1 593 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 LGI4Q8N135 537 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 CELF5Q8N6W0 485 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 C1GALT1C1Q96EU7 318 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 PAWRQ96IZ0 340 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 LMF1Q96S06 567 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 PLA2G12BQ9BX93 195 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 GOLGA2P5Q9HBQ8 144 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 JADE2Q9NQC1 790 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 NR2E3Q9Y5X4 410 aa5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 MYBBP1AQ9BQG0 1328 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-238ENST00000523298 H3BML4 177 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 KIF3BO15066 747 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 ENDOD1O94919 500 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 CR2P20023 1033 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 PTTG1IPP53801 180 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 RAC3P60763 192 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 TLE1Q04724 770 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 SNAPC2Q13487 334 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 KHDC1Q4VXA5 237 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 KRT40Q6A162 431 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 ZNF572Q7Z3I7 529 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 XYLT1Q86Y38 959 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 SP8Q8IXZ3 490 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 OR5M3Q8NGP4 307 aa5.88□□□□□ -1.47
CTNNA1-238ENST00000523298 RELTQ969Z4 430 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms