RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CD302Q8IX05 232 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 EIF1ADQ8N9N8 165 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DHX38Q92620 1227 aaKnown RBP11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PICK1Q9NRD5 415 aa11.6□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GNGT1P63211 74 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DCAF15Q66K64 600 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MAATS1Q7Z4T9 603 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 OR2W6PQ8NHA6 318 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CCDC26Q8TAB7 109 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NSUN6Q8TEA1 469 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 POMGNT1Q8WZA1 660 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HVCN1Q96D96 273 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 BTBD6Q96KE9 485 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TRIM31Q9BZY9 425 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TMEM8AQ9HCN3 771 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CYP39A1Q9NYL5 469 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PNMA2Q9UL42 364 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 COQ4Q9Y3A0 265 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DLATP10515 647 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KCNA4P22459 653 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ATP1A2P50993 1020 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MFAP3P55082 362 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PTENP60484 403 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PRKCEQ02156 737 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MESDQ14696 234 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ANGEL2Q5VTE6 544 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 C11orf63Q6NUN7 778 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 OTUD6AQ7L8S5 288 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SEC14L1Q92503 715 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TATDN2Q93075 761 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MFSD14AQ96MC6 490 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PDLIM7Q9NR12 457 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ADAMTS5Q9UNA0 930 aa11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP1-204ENST00000522774 H0YGN5 161 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PPFIA4O75335 1185 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GPC3P51654 580 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ACTR2P61160 394 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PDCLQ13371 301 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CEP85LQ5SZL2 805 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SV2AQ7L0J3 742 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ATP8B4Q8TF62 1192 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GLG1Q92896 1179 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PI4K2AQ9BTU6 479 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 JPH1Q9HDC5 661 aaPredicted RBP11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NFS1Q9Y697 457 aa11.58□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TULP2O00295 520 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 PSAPP07602 524 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 CYP11B1P15538 503 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 COMTP21964 271 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 SKOR1P84550 965 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 TCEAL1Q15170 157 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 FBXL13Q8NEE6 735 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 ZNF526Q8TF50 670 aaPredicted RBP11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 RAB20Q9NX57 234 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 SLC9A2Q9UBY0 812 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 LCTP09848 1927 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 SP2Q02086 613 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 LMBRD2Q68DH5 695 aaPredicted RBP11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 ABHD15Q6UXT9 468 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 SRLQ86TD4 932 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 ZDHHC14Q8IZN3 488 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 TMC2Q8TDI7 906 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 C12orf42Q96LP6 360 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 NT5C1BQ96P26 610 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 ZSWIM1Q9BR11 485 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 FAM213AQ9BRX8 229 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 CYP26B1Q9NR63 512 aa11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 UTP11Q9Y3A2 253 aaKnown RBP11.58□□□□□ -0.56
RAB11FIP1-204ENST00000522774 FZD9O00144 591 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 MAFGO15525 162 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 PEX10O60683 326 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 DGAT1O75907 488 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 GZMAP12544 262 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 OAZ1P54368 228 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 FSTL1Q12841 308 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 MTERF2Q49AM1 385 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 TRPM4Q8TD43 1214 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 DDX1Q92499 740 aaKnown RBP11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 POLR3FQ9H1D9 316 aaPredicted RBP11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 C17orf75Q9HAS0 396 aa11.57□□□□□ -0.56
RAB11FIP1-204ENST00000522774 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms