RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 CAPSQ13938 189 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 OTUD6AQ7L8S5 288 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 TPH2Q8IWU9 490 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 CNNM3Q8NE01 707 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 SMG7Q92540 1137 aaKnown RBP17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 MTRQ99707 1265 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 RTP3Q9BQQ7 232 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 RHOBTB2Q9BYZ6 727 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 TM6SF1Q9BZW5 370 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 CSRNP2Q9H175 543 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
TRAPPC9-213ENST00000522504 INO80B-WBP1J3KQ70 363 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 TGM5O43548 720 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 CTDNEP1O95476 244 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 ARF4P18085 180 aaPredicted RBP17■□□□□ 0.31
TRAPPC9-213ENST00000522504 RPL17P18621 184 aaKnown RBP17■□□□□ 0.31
TRAPPC9-213ENST00000522504 NR5A1Q13285 461 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 LILRA6Q6PI73 481 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 CPLX2Q6PUV4 134 aaKnown RBP17■□□□□ 0.31
TRAPPC9-213ENST00000522504 IFNLR1Q8IU57 520 aaPredicted RBP17■□□□□ 0.31
TRAPPC9-213ENST00000522504 GLYCTKQ8IVS8 523 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 NT5C3AQ9H0P0 336 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 PDRG1Q9NUG6 133 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 WNT16Q9UBV4 365 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 CA14Q9ULX7 337 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 SSX2IPQ9Y2D8 614 aa17■□□□□ 0.31
TRAPPC9-213ENST00000522504 WNT7AO00755 349 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 GLRA2P23416 452 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 AXLP30530 894 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 ARL2P36404 184 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 FUT10Q6P4F1 479 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 CYP26C1Q6V0L0 522 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 HSD17B14Q9BPX1 270 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 PAAF1Q9BRP4 392 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 KLK14Q9P0G3 267 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 TPCN1Q9ULQ1 816 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 GIT1Q9Y2X7 761 aa16.99■□□□□ 0.31
TRAPPC9-213ENST00000522504 DOCK8Q8NF50 2099 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 STK25O00506 426 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 MARCH6O60337 910 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 LAMP2P13473 410 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 PCBP1Q15365 356 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 STAMQ92783 540 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 TNFRSF25Q93038 417 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 RPP25Q9BUL9 199 aaKnown RBP16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 COLEC11Q9BWP8 271 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 CXCL16Q9H2A7 254 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 TBC1D17Q9HA65 648 aa16.98■□□□□ 0.31
TRAPPC9-213ENST00000522504 STK36Q9NRP7 1315 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 TTLL13PA6NNM8 815 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 ANHXE9PGG2 379 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 LYPLA2O95372 231 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 NPTXRO95502 500 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 SRFP11831 508 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 FOXK2Q01167 660 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 POU5F1BQ06416 359 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 HTR4Q13639 388 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 RTP2Q5QGT7 225 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 GET4Q7L5D6 327 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 PRKD2Q9BZL6 878 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 PLEKHA4Q9H4M7 779 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 DLGAP2Q9P1A6 1054 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 FNIP2Q9P278 1114 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 ADAM28Q9UKQ2 775 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 R4GN57 208 aa16.97■□□□□ 0.31
TRAPPC9-213ENST00000522504 ARID2Q68CP9 1835 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 A0A1B0GUA9 196 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 EPB41L2O43491 1005 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 PFKFB2O60825 505 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 CDKL5O76039 1030 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 DCNP07585 359 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 FDPSP14324 419 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 RARRES1P49788 294 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 TFDP1Q14186 410 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 USP41Q3LFD5 358 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 SLFN12Q8IYM2 578 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 PIGOQ8TEQ8 1089 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 NFKBIZQ9BYH8 718 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 PIDD1Q9HB75 910 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 GPRC5CQ9NQ84 441 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 ANKEF1Q9NU02 776 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 ZDHHC7Q9NXF8 308 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 DPP7Q9UHL4 492 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 NUMBLQ9Y6R0 609 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 GPR179Q6PRD1 2367 aa16.96■□□□□ 0.31
TRAPPC9-213ENST00000522504 NR1I2O75469 434 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 DGAT1O75907 488 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms