RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 MCF2P10911 925 aa26.39■■□□□ 1.82
PVT1-212ENST00000521951 HARSP12081 509 aaKnown RBP26.39■■□□□ 1.82
PVT1-212ENST00000521951 EDRF1Q3B7T1 1238 aa26.39■■□□□ 1.82
PVT1-212ENST00000521951 DUSP9Q99956 384 aaKnown RBP26.39■■□□□ 1.82
PVT1-212ENST00000521951 MSTO1Q9BUK6 570 aa26.39■■□□□ 1.82
PVT1-212ENST00000521951 TRAIPQ9BWF2 469 aa26.39■■□□□ 1.82
PVT1-212ENST00000521951 MICAL3Q7RTP6 2002 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 NR3C1P04150 777 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 EPHB4P54760 987 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 IKBKEQ14164 716 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 NFIL3Q16649 462 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 DCAF4L1Q3SXM0 396 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 FOXR2Q6PJQ5 311 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 APBB1IPQ7Z5R6 666 aaPredicted RBP26.39■■□□□ 1.81
PVT1-212ENST00000521951 FAM105AQ9NUU6 356 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 DMAC2Q9NW81 257 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 HSPBP1Q9NZL4 362 aa26.39■■□□□ 1.81
PVT1-212ENST00000521951 AGO2Q9UKV8 859 aaKnown RBP26.39■■□□□ 1.81
PVT1-212ENST00000521951 CYP2J2P51589 502 aa26.38■■□□□ 1.81
PVT1-212ENST00000521951 SLC9A9Q8IVB4 645 aa26.38■■□□□ 1.81
PVT1-212ENST00000521951 ZSWIM2Q8NEG5 633 aa26.38■■□□□ 1.81
PVT1-212ENST00000521951 TMEM174Q8WUU8 243 aa26.38■■□□□ 1.81
PVT1-212ENST00000521951 TRIM6Q9C030 488 aaPredicted RBP26.38■■□□□ 1.81
PVT1-212ENST00000521951 C9IYK1 514 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 OGTO15294 1046 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 MYBPC2Q14324 1141 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 SLC24A5Q71RS6 500 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 THNSL1Q8IYQ7 743 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 NAT10Q9H0A0 1025 aaKnown RBP26.37■■□□□ 1.81
PVT1-212ENST00000521951 TSPY26PQ9H489 355 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 PCDHB2Q9Y5E7 798 aa26.37■■□□□ 1.81
PVT1-212ENST00000521951 A0A0U1RQF3 1178 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.36■■□□□ 1.81
PVT1-212ENST00000521951 KIAA0391O15091 583 aaKnown RBP26.36■■□□□ 1.81
PVT1-212ENST00000521951 FAM189A1O60320 539 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 NR2F2P24468 414 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 FAM189BP81408 668 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 ADAM9Q13443 819 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 SEZ6Q53EL9 994 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 ZNF365Q70YC5 407 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 CEP120Q8N960 986 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 SMG8Q8ND04 991 aaKnown RBP26.36■■□□□ 1.81
PVT1-212ENST00000521951 SAAL1Q96ER3 474 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 ANP32EQ9BTT0 268 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 C1orf112Q9NSG2 853 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 IPPQ9Y573 584 aa26.36■■□□□ 1.81
PVT1-212ENST00000521951 ABHD14A-ACY1A0A1B0GW23 586 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 GOLGA8IPA6NC78 632 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 GOLGA8JA6NMD2 632 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 ZNF623O75123 536 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 FGBP02675 491 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 ACTN1P12814 892 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 RPL13P26373 211 aaKnown RBP26.35■■□□□ 1.81
PVT1-212ENST00000521951 RAB27AP51159 221 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 FKBP3Q00688 224 aaKnown RBP26.35■■□□□ 1.81
PVT1-212ENST00000521951 TMEM240Q5SV17 173 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 ZC3H3Q8IXZ2 948 aaKnown RBP26.35■■□□□ 1.81
PVT1-212ENST00000521951 XXYLT1Q8NBI6 393 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 ENOX1Q8TC92 643 aaKnown RBP26.35■■□□□ 1.81
PVT1-212ENST00000521951 NXF3Q9H4D5 531 aaKnown RBP26.35■■□□□ 1.81
PVT1-212ENST00000521951 HES2Q9Y543 173 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 CEP290O15078 2479 aa26.35■■□□□ 1.81
PVT1-212ENST00000521951 LDHAP00338 332 aaKnown RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 ZNF165P49910 485 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 OSTNP61366 133 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 ZBTB41Q5SVQ8 909 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 MRPL10Q7Z7H8 261 aaKnown RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 ECHDC2Q86YB7 292 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 GPD1LQ8N335 351 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 CSGALNACT2Q8N6G5 542 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 EEF2KMTQ96G04 330 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 BPIFA3Q9BQP9 254 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.34■■□□□ 1.818e-8■■■□□ 15.3
PVT1-212ENST00000521951 TTC3P53804 2025 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 CETN3O15182 167 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 EXTL3O43909 919 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 EXOC3O60645 756 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 STAG3L1P0CL83 205 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 SKIP12755 728 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 GRM5P41594 1212 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 MAGEA10P43363 369 aaPredicted RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 ACOT2P49753 483 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 PSRC1Q6PGN9 363 aaPredicted RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 CRELD2Q6UXH1 353 aaPredicted RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.34■■□□□ 1.81
PVT1-212ENST00000521951 LRRC55Q6ZSA7 311 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 OTOP2Q7RTS6 562 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 TMEM192Q8IY95 271 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 NOC3LQ8WTT2 800 aaKnown RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 FBXL18Q96ME1 805 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 FAM213AQ9BRX8 229 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 SRRTQ9BXP5 876 aaKnown RBP26.34■■□□□ 1.81
PVT1-212ENST00000521951 RNF39Q9H2S5 420 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 SNTG2Q9NY99 539 aa26.34■■□□□ 1.81
PVT1-212ENST00000521951 EFCAB14O75071 495 aa26.33■■□□□ 1.81
PVT1-212ENST00000521951 BAIAP3O94812 1187 aa26.33■■□□□ 1.81
PVT1-212ENST00000521951 CAVIN2O95810 425 aa26.33■■□□□ 1.81
PVT1-212ENST00000521951 ATF7P17544 494 aaPredicted RBP26.33■■□□□ 1.81
PVT1-212ENST00000521951 IBSPP21815 317 aaPredicted RBP26.33■■□□□ 1.81
PVT1-212ENST00000521951 TNFSF9P41273 254 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms