RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 NMIQ13287 307 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 SIM2Q14190 667 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 GAS6Q14393 721 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 GRM4Q14833 912 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 NOMO2Q5JPE7 1267 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 STPG1Q5TH74 334 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 ABHD15Q6UXT9 468 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 TPRG1Q6ZUI0 275 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 CCDC60Q8IWA6 550 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 RNF168Q8IYW5 571 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 TNPO1Q92973 898 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 NELL2Q99435 816 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 PLA2G2FQ9BZM2 168 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 CHRDQ9H2X0 955 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 MRPL17Q9NRX2 175 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 MARCH5Q9NX47 278 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 CDH7Q9ULB5 785 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 GREB1Q4ZG55 1949 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 CFAP46Q8IYW2 2715 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 F8W810 466 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 MAFGO15525 162 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 TGM5O43548 720 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 GLUD1P00367 558 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 DARSP14868 501 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 FSHRP23945 695 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 PHKA2P46019 1235 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 SLC26A2P50443 739 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 AK2P54819 239 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 NRLP54845 237 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 SATB1Q01826 763 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 TRAF1Q13077 416 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 IFIT1BQ5T764 474 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 PSAPL1Q6NUJ1 521 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 CYB5R4Q7L1T6 521 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 METTL13Q8N6R0 699 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 FGF13Q92913 245 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 KXD1Q9BQD3 176 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 TRAIPQ9BWF2 469 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 GBP3Q9H0R5 595 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 HEBP1Q9NRV9 189 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 COL1A2P08123 1366 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 SPAG17Q6Q759 2223 aa10.09□□□□□ -0.79
TRAPPC9-212ENST00000521944 APC2O95996 2303 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 NFASCO94856 1347 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 CHURC1-FNTBB4DL54 471 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 NRG2O14511 850 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF213O14771 459 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 SOD2P04179 222 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ADH1AP07327 375 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 MX1P20591 662 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 CTHP32929 405 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 FNTBP49356 437 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 WNT7BP56706 349 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PRR20EP86478 221 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PRR20CP86479 221 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PRR20DP86480 221 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PRR20BP86481 221 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PRR20AP86496 221 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 TROAPQ12815 778 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF852Q6ZMS4 543 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 GRASPQ7Z6J2 395 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PALB2Q86YC2 1186 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ITFG1Q8TB96 612 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 EVI5LQ96CN4 794 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 BBC3Q96PG8 261 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 C2orf42Q9NWW7 574 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZDHHC7Q9NXF8 308 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 INPP5FQ9Y2H2 1132 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZFP37Q9Y6Q3 630 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ACACAQ13085 2346 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 HECTD1Q9ULT8 2610 aa10.08□□□□□ -0.8
TRAPPC9-212ENST00000521944 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 PCNX2A6NKB5 2137 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 K7ESF4 209 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 NRP1O14786 923 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 NCAM2O15394 837 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 DHX15O43143 795 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF623O75123 536 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 CAPNS1P04632 268 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF806P0C7X5 589 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 NT5C2P49902 561 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 GPC3P51654 580 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 PFKPQ01813 784 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 FOXC1Q12948 553 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 UBE2SQ16763 222 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 AASDHQ4L235 1098 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 AGMOQ6ZNB7 445 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 LRRC71Q8N4P6 559 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 PHKBQ93100 1093 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 B3GALT6Q96L58 329 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 MXRA8Q9BRK3 442 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms