RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MMP14P50281 582 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 MEI1Q5TIA1 1274 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 ALS2CLQ60I27 953 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 HOOK3Q86VS8 718 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 LRRC71Q8N4P6 559 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 BTBD6Q96KE9 485 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 FMO2Q99518 471 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 TRIM51Q9BSJ1 452 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 VPS33BQ9H267 617 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 TAF1DQ9H5J8 278 aaPredicted RBP10.91□□□□□ -0.66
MCF2-209ENST00000520602 ADAM22Q9P0K1 906 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 DOCK2Q92608 1830 aa10.91□□□□□ -0.66
MCF2-209ENST00000520602 PGK2P07205 417 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 TMEM253P0C7T8 217 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 OSBPP22059 807 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 RFX1P22670 979 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 MAPK6Q16659 721 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 DPP9Q86TI2 863 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 SH2D3CQ8N5H7 860 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.9□□□□□ -0.66
MCF2-209ENST00000520602 TMEM117Q9H0C3 514 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 FAM114A2Q9NRY5 505 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 DBR1Q9UK59 544 aaKnown RBP10.9□□□□□ -0.66
MCF2-209ENST00000520602 E7EVH7 732 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 RTN2O75298 545 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 SLCO1A2P46721 670 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 CCT5P48643 541 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 HSD17B4P51659 736 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 RWDD2BP57060 319 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 CLUL1Q15846 466 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 PHLDB3Q6NSJ2 640 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 TRPM4Q8TD43 1214 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 PSPC1Q8WXF1 523 aaKnown RBP10.9□□□□□ -0.66
MCF2-209ENST00000520602 SLC10A4Q96EP9 437 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 KIAA1586Q9HCI6 787 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 A0A1B0GUL6 1792 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 MMEP08473 750 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 MYBL2P10244 700 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
MCF2-209ENST00000520602 DLK2Q6UY11 383 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
MCF2-209ENST00000520602 SLC47A2Q86VL8 602 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 CLEC4DQ8WXI8 215 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 TMEM8AQ9HCN3 771 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 MAP3K20Q9NYL2 800 aaKnown RBP10.9□□□□□ -0.66
MCF2-209ENST00000520602 TAS2R14Q9NYV8 317 aa10.9□□□□□ -0.66
MCF2-209ENST00000520602 ARAP2Q8WZ64 1704 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 FRMD3A2A2Y4 597 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 MIF4GDA9UHW6 222 aaKnown RBP10.9□□□□□ -0.67
MCF2-209ENST00000520602 COMTP21964 271 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 PDCLQ13371 301 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 CUL1Q13616 776 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 BMT2Q1RMZ1 405 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 CAPN12Q6ZSI9 719 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 MICALCLQ6ZW33 695 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 SV2AQ7L0J3 742 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 WNK4Q96J92 1243 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 CCDC77Q9BR77 488 aa10.9□□□□□ -0.67
MCF2-209ENST00000520602 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.67
MCF2-209ENST00000520602 IGSF9BQ9UPX0 1349 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 NAV1Q8NEY1 1877 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 CNTNAP1P78357 1384 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 CCNE2O96020 404 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 LDHAP00338 332 aaKnown RBP10.89□□□□□ -0.67
MCF2-209ENST00000520602 ITGA4P13612 1032 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 ANXA13P27216 316 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 TMEM132BQ14DG7 1078 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 NIPA1Q7RTP0 329 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 SEPT1Q8WYJ6 367 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 TATDN2Q93075 761 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.89□□□□□ -0.67
MCF2-209ENST00000520602 ZNF148Q9UQR1 794 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 RGS16O15492 202 aaPredicted RBP10.89□□□□□ -0.67
MCF2-209ENST00000520602 CALCAP01258 141 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 HLA-DRAP01903 254 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 SCP2P22307 547 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 GBP2P32456 591 aaPredicted RBP10.89□□□□□ -0.67
MCF2-209ENST00000520602 HOXD13P35453 343 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 TFDP1Q14186 410 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 EPM2AIP1Q7L775 607 aaPredicted RBP10.89□□□□□ -0.67
MCF2-209ENST00000520602 CCDC60Q8IWA6 550 aaPredicted RBP10.89□□□□□ -0.67
MCF2-209ENST00000520602 OR2W6PQ8NHA6 318 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 PASKQ96RG2 1323 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 PLA2G6O60733 806 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 GNA15P30679 374 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 CYP2C19P33261 490 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 FOXR2Q6PJQ5 311 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 ZNF662Q6ZS27 426 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 ARMC9Q7Z3E5 817 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 MICALL1Q8N3F8 863 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 OTUD6BQ8N6M0 293 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 C1orf54Q8WWF1 131 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 APOL6Q9BWW8 343 aa10.89□□□□□ -0.67
MCF2-209ENST00000520602 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms