RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ZBTB33Q86T24 672 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 USP38Q8NB14 1042 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 TMEM40Q8WWA1 233 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 CCDC51Q96ER9 411 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 MRFAP1L1Q96HT8 127 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 CPB2Q96IY4 423 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 ZBTB45Q96K62 511 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 FAM213AQ9BRX8 229 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 TUBGCP2Q9BSJ2 902 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 XPO4Q9C0E2 1151 aaKnown RBP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 CDT1Q9H211 546 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 VPS16Q9H269 839 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 PDZD7Q9H5P4 517 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 AGPAT5Q9NUQ2 364 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 USP20Q9Y2K6 914 aa9.76□□□□□ -0.85
CSMD1-208ENST00000520561 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSMD1-208ENST00000520561 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 TTLL13PA6NNM8 815 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 GOLGA6L6A8MZA4 724 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 GPR182O15218 404 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 AP5Z1O43299 807 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 CD4P01730 458 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 CHRNA1P02708 482 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 IQCF3P0C7M6 154 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 CKBP12277 381 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 SELPP16109 830 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 CDC25BP30305 580 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 RBL2Q08999 1139 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 CCDC173Q0VFZ6 552 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 PAK2Q13177 524 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 VWA3BQ502W6 1294 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 FBXO47Q5MNV8 452 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 ZNF618Q5T7W0 954 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 C1orf53Q5VUE5 145 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 EEF1DP3Q658K8 133 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 SLC27A1Q6PCB7 646 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 LRRC8DQ7L1W4 858 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 ANKRD33Q7Z3H0 272 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-208ENST00000520561 FAM228AQ86W67 206 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 CBWD2Q8IUF1 395 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 TRIM59Q8IWR1 403 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 RDH13Q8NBN7 331 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 FBXL18Q96ME1 805 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 TRIM6Q9C030 488 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-208ENST00000520561 PTPRHQ9HD43 1115 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 RBAKQ9NYW8 714 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-208ENST00000520561 ATP11BQ9Y2G3 1177 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
CSMD1-208ENST00000520561 SQORQ9Y6N5 450 aa9.75□□□□□ -0.85
CSMD1-208ENST00000520561 TANC1Q9C0D5 1861 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 A0A1B0GUA9 196 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 LRRC10BA6NIK2 292 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 TULP1O00294 542 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 ABLIM1O14639 778 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 STX10O60499 249 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 N4BP1O75113 896 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 NPTXRO95502 500 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 AFPP02771 609 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 ADRB2P07550 413 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 GHRP10912 638 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 VAMP7P51809 220 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 ENPEPQ07075 957 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 CYP24A1Q07973 514 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 PSMD6Q15008 389 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 TWF2Q6IBS0 349 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 APTXQ7Z2E3 356 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 CDR2LQ86X02 465 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 BRSK2Q8IWQ3 736 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 DRC7Q8IY82 874 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 PAWRQ96IZ0 340 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 TOX2Q96NM4 488 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 FNBP1Q96RU3 617 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 CCDC94Q9BW85 323 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 NDST4Q9H3R1 872 aa9.74□□□□□ -0.85
CSMD1-208ENST00000520561 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
CSMD1-208ENST00000520561 TRIM49P0CI25 452 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 TRIM49CP0CI26 452 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-208ENST00000520561 GRM5P41594 1212 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 ACOT2P49753 483 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 MYL7Q01449 175 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 UBXN1Q04323 297 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 TLE2Q04725 743 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 LPIN1Q14693 890 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 SURF1Q15526 300 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 MIIPQ5JXC2 388 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 THNSL1Q8IYQ7 743 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 ZSWIM2Q8NEG5 633 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 TMC2Q8TDI7 906 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 SLC35C1Q96A29 364 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 CCDC127Q96BQ5 260 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 BORCS6Q96GS4 357 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 MFSD14AQ96MC6 490 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 PCMTD1Q96MG8 357 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms