RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 ZBTB39O15060 712 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 TSPAN1O60635 241 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 LAMP2P13473 410 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 FDPSP14324 419 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 XBP1P17861 261 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 AXLP30530 894 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 MLH1P40692 756 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 OR1G1P47890 313 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 GPR152Q8TDT2 470 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 TCP11Q8WWU5 503 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 TNFRSF25Q93038 417 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 CCDC51Q96ER9 411 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 DYDC2Q96IM9 177 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 ZFP42Q96MM3 310 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 GAD1Q99259 594 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 XPNPEP1Q9NQW7 623 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 SLC2A4RGQ9NR83 387 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 ZDHHC7Q9NXF8 308 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 CA14Q9ULX7 337 aa17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 TDRD15B5MCY1 1934 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-208ENST00000520003 TGM5O43548 720 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 NEFLP07196 543 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 SCNN1GP51170 649 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 PTENP60484 403 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 NR5A1Q13285 461 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 HTR4Q13639 388 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 EMC2Q15006 297 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 AMHR2Q16671 573 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 NCAPH2Q6IBW4 605 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 GSTCDQ8NEC7 633 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 RMDN1Q96DB5 314 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 GPR62Q9BZJ7 368 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 FNIP2Q9P278 1114 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 ORC3Q9UBD5 711 aaPredicted RBP17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 HES2Q9Y543 173 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 R4GN57 208 aa17.46■□□□□ 0.39
CSGALNACT1-208ENST00000520003 STK25O00506 426 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ERLIN2O94905 339 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 SLITRK3O94933 977 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 SPATA31D3P0C874 917 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 MYBP10242 640 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ANAPC15P60006 121 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 POU5F1BQ06416 359 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 CTTNQ14247 550 aaKnown RBP17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 NOTUMQ6P988 496 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 SPATA31D4Q6ZUB0 917 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 OTUD6AQ7L8S5 288 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 PRKD2Q9BZL6 878 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 CSRNP2Q9H175 543 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ZSWIM4Q9H7M6 989 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ARHGEF3Q9NR81 526 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 GIT1Q9Y2X7 761 aa17.45■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ZMYM2Q9UBW7 1377 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 FRYLO94915 3013 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 LARGE1O95461 756 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 DCNP07585 359 aaKnown RBP17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 MXD4Q14582 209 aaPredicted RBP17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 XKR9Q5GH70 373 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 FUT10Q6P4F1 479 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 PALB2Q86YC2 1186 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 CPB2Q96IY4 423 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 B3GALT6Q96L58 329 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 MTRQ99707 1265 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 COLEC11Q9BWP8 271 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 SIT1Q9Y3P8 196 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 OTOGLQ3ZCN5 2332 aa17.44■□□□□ 0.38
CSGALNACT1-208ENST00000520003 WNT7AO00755 349 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 NR1I2O75469 434 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 LYPLA2O95372 231 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 SP9P0CG40 484 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 GLULP15104 373 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 KRT2P35908 639 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 STARD6P59095 220 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 MBTD1Q05BQ5 628 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 USP41Q3LFD5 358 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 C1orf210Q8IVY1 113 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 KCNG4Q8TDN1 519 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 WASF1Q92558 559 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 HSD17B14Q9BPX1 270 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 EIF2AK1Q9BQI3 630 aaKnown RBP17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 NFKBIZQ9BYH8 718 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ZFP37Q9Y6Q3 630 aaPredicted RBP17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 NUMBLQ9Y6R0 609 aa17.43■□□□□ 0.38
CSGALNACT1-208ENST00000520003 MARCH6O60337 910 aa17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ZMYND10O75800 440 aa17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ARF4P18085 180 aaPredicted RBP17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 CREMQ03060 361 aa17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 ME3Q16798 604 aa17.42■□□□□ 0.38
CSGALNACT1-208ENST00000520003 DCLRE1AQ6PJP8 1040 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms