RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 AGMOQ6ZNB7 445 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 UNC13DQ70J99 1090 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
HPS4-218ENST00000519774 LRRC43Q8N309 656 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 CDT1Q9H211 546 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 PRDM12Q9H4Q4 367 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 OLFML3Q9NRN5 406 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 LAMA2P24043 3122 aaKnown RBP12.98□□□□□ -0.33
HPS4-218ENST00000519774 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 MYBP10242 640 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
HPS4-218ENST00000519774 SCP2P22307 547 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 ABCD1P33897 745 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 OSTNP61366 133 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 ERVK-21P61565 698 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 GTF2BQ00403 316 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
HPS4-218ENST00000519774 NOMO2Q5JPE7 1267 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
HPS4-218ENST00000519774 CEP120Q8N960 986 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 GLIS3Q8NEA6 775 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 CCDC34Q96HJ3 373 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 ZBTB45Q96K62 511 aaPredicted RBP12.98□□□□□ -0.33
HPS4-218ENST00000519774 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
HPS4-218ENST00000519774 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 ST6GALNAC4Q9H4F1 302 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
HPS4-218ENST00000519774 EXOC1Q9NV70 894 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 SNTG2Q9NY99 539 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 MYO9BQ13459 2157 aa12.98□□□□□ -0.33
HPS4-218ENST00000519774 RFXAPO00287 272 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
HPS4-218ENST00000519774 NR1I2O75469 434 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 OFD1O75665 1012 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 TOM1L1O75674 476 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 PPP1R37O75864 691 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 RECQL4O94761 1208 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 PRPF6O94906 941 aaKnown RBP12.97□□□□□ -0.33
HPS4-218ENST00000519774 MCF2P10911 925 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 PROZP22891 400 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 RNASELQ05823 741 aaKnown RBP12.97□□□□□ -0.33
HPS4-218ENST00000519774 ALCAMQ13740 583 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
HPS4-218ENST00000519774 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 STXBP4Q6ZWJ1 553 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 ENGASEQ8NFI3 743 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 MYLIPQ8WY64 445 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 RPS6KC1Q96S38 1066 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 GAD1Q99259 594 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 IKZF4Q9H2S9 585 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 PTPRHQ9HD43 1115 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 UBN1Q9NPG3 1134 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 TBC1D13Q9NVG8 400 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 MTMR10Q9NXD2 777 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 RWDD3Q9Y3V2 267 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
HPS4-218ENST00000519774 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
HPS4-218ENST00000519774 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 ARL5CA6NH57 179 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 TISP43B9A030 160 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 HAX1O00165 279 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 ABLIM1O14639 778 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 CLDN3O15551 220 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 KLRC4O43908 158 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 KINO60870 393 aaKnown RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.33
HPS4-218ENST00000519774 POMCP01189 267 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 PIGRP01833 764 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.33
HPS4-218ENST00000519774 MYL1P05976 194 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 BMPR1AP36894 532 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 PBX3P40426 434 aa12.96□□□□□ -0.33
HPS4-218ENST00000519774 SCNN1GP51170 649 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms