RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MTSS1LQ765P7 747 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 PALB2Q86YC2 1186 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 RNF169Q8NCN4 708 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 PHKBQ93100 1093 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 CAMK1GQ96NX5 476 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 PPP1R16BQ96T49 567 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 UBA5Q9GZZ9 404 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 MBD1Q9UIS9 605 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 ZNF215Q9UL58 517 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 NOB1Q9ULX3 412 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 TNNQ9UQP3 1299 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 PCDHA2Q9Y5H9 948 aa7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 ZFP37Q9Y6Q3 630 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-216ENST00000519489 CCDC194A0A1B0GVG4 234 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 ENO4A6NNW6 628 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 MAN2B1O00754 1011 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 ECI2O75521 394 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 EFEMP2O95967 443 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 GLUD1P00367 558 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 CCNYL3P0C7X3 344 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 CCDC192P0DO97 292 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 HSPD1P10809 573 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 PDHBP11177 359 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 MS4A1P11836 297 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 TCF7P36402 384 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 SOX9P48436 509 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 HSD17B4P51659 736 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 AFF1P51825 1210 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 OS9Q13438 667 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 BMS1Q14692 1282 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 PLCB4Q15147 1175 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 PTPRNQ16849 979 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 DESI1Q6ICB0 168 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 KCNV1Q6PIU1 500 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 TXNDC11Q6PKC3 985 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 STOX1Q6ZVD7 989 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 SLCO6A1Q86UG4 719 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 TMC8Q8IU68 726 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 KIAA0319LQ8IZA0 1049 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 SSH3Q8TE77 659 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 ING5Q8WYH8 240 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 FCRL3Q96P31 734 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 RPS6KC1Q96S38 1066 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 SLC32A1Q9H598 525 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 RXFP1Q9HBX9 757 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 FSCN3Q9NQT6 498 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 CHST12Q9NRB3 414 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 HCFC1R1Q9NWW0 138 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 NOP58Q9Y2X3 529 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 PIAS3Q9Y6X2 628 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 LRBAP50851 2863 aa7.85□□□□□ -1.15
CTNNA1-216ENST00000519489 SPAG17Q6Q759 2223 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 BSNQ9UPA5 3926 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 UPK3BL1B0FP48 263 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 UPK3BL2E5RIL1 263 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 F8W810 466 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 ARNTLO00327 626 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 SLC28A2O43868 658 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 GOLGA8HP0CJ92 632 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 NDUFV2P19404 249 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 HOXA13P31271 388 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 EIF2S3P41091 472 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 MAPK8P45983 427 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 AK2P54819 239 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 GHRHRQ02643 423 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 UBE3CQ15386 1083 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 ZNF423Q2M1K9 1284 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 LONRF3Q496Y0 759 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 AACSQ86V21 672 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 MAP4K3Q8IVH8 894 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 ABI1Q8IZP0 508 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 DNASE1L2Q92874 299 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 LPPQ93052 612 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 B3GALT6Q96L58 329 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 INPP4AQ96PE3 977 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 TMEM47Q9BQJ4 181 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 ZNF334Q9HCZ1 680 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 TBC1D13Q9NVG8 400 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 ZDHHC7Q9NXF8 308 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 IL17BQ9UHF5 180 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 HDAC5Q9UQL6 1122 aa7.84□□□□□ -1.15
CTNNA1-216ENST00000519489 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 SMIM35A0A1B0GVV1 85 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 TRABD2BA6NFA1 517 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 KHNYNO15037 678 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 GAS2O43903 313 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 ATP9AO75110 1047 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 DDHD2O94830 711 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 GNAI3P08754 354 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 FTH1P19P0C7X4 201 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 SNHG28P0DPA3 235 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 CD59P13987 128 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 RPL17P18621 184 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 LY6DQ14210 128 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 KIZQ2M2Z5 673 aa7.83□□□□□ -1.16
CTNNA1-216ENST00000519489 SLC5A9Q2M3M2 681 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms