RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 GTF2H1P32780 548 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 CYLC2Q14093 348 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-208ENST00000519004 DPY19L2P1Q6NXN4 242 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 AADACL2Q6P093 401 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 OLFML1Q6UWY5 402 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 RGS9BPQ6ZS82 235 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 MTDHQ86UE4 582 aaKnown RBP14.47□□□□□ -0.09
PABPC1-208ENST00000519004 BLIDQ8IZY5 108 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 DGCR14Q96DF8 476 aaKnown RBP14.47□□□□□ -0.09
PABPC1-208ENST00000519004 RNF41Q9H4P4 317 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-208ENST00000519004 EBF3Q9H4W6 596 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 ARL8BQ9NVJ2 186 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 DDX25Q9UHL0 483 aaKnown RBP14.47□□□□□ -0.09
PABPC1-208ENST00000519004 LGALS13Q9UHV8 139 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 EFR3BQ9Y2G0 817 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 ATAD5Q96QE3 1844 aa14.47□□□□□ -0.09
PABPC1-208ENST00000519004 C2CD2LO14523 706 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 MUTP22033 750 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 TMEM63BQ5T3F8 832 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 B3GNT6Q6ZMB0 384 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 ZDHHC14Q8IZN3 488 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 ABHD8Q96I13 439 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 TSG101Q99816 390 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 USP29Q9HBJ7 922 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 PFDN4Q9NQP4 134 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 EMILIN3Q9NT22 766 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 TMOD4Q9NZQ9 345 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 NDUFA13Q9P0J0 144 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 MYMKA6NI61 221 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 SNRPA1P09661 255 aaKnown RBP14.46□□□□□ -0.09
PABPC1-208ENST00000519004 ACTN1P12814 892 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 ANPEPP15144 967 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 VPS41P49754 854 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 PPATQ06203 517 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 HNRNPDQ14103 355 aaKnown RBP14.46□□□□□ -0.09
PABPC1-208ENST00000519004 LRRC41Q15345 812 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 PFKFB3Q16875 520 aaPredicted RBP14.46□□□□□ -0.09
PABPC1-208ENST00000519004 TRIM59Q8IWR1 403 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 PROM2Q8N271 834 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 ALG3Q92685 438 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 ZSCAN10Q96SZ4 725 aaPredicted RBP14.46□□□□□ -0.09
PABPC1-208ENST00000519004 TBCCD1Q9NVR7 557 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
PABPC1-208ENST00000519004 FAM47DPA6NHR8 397 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 A8MXQ7 604 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 RGL2O15211 777 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 GYG2O15488 501 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TCEA3O75764 348 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 ZWINTO95229 277 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 IFIT1BQ5T764 474 aaKnown RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 FOXR2Q6PJQ5 311 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 LCORLQ8N3X6 602 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 MAGEB6Q8N7X4 407 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.18e-72■■■□□ 14.8
PABPC1-208ENST00000519004 CTNNBL1Q8WYA6 563 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 FAIMQ9NVQ4 179 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TBK1Q9UHD2 729 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 ZNF180Q9UJW8 692 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 ACTL7BQ9Y614 415 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 STK24Q9Y6E0 443 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 MYH3P11055 1940 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 PVALEFA0A1B0GWK0 134 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 SPDYE16A6NNV3 312 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 SMIM22K7EJ46 135 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TP73O15350 636 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 ALDH2P05091 517 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 PORP16435 677 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 CTNNA2P26232 953 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 PRKCIP41743 596 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 MTTPP55157 894 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 DCTN2Q13561 401 aaKnown RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TMEM53Q6P2H8 277 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 EPM2AIP1Q7L775 607 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 MCUR1Q96AQ8 359 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 AK8Q96MA6 479 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 UBN1Q9NPG3 1134 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TIMMDC1Q9NPL8 285 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 RIC8AQ9NPQ8 531 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 DDX18Q9NVP1 670 aaKnown RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 KANSL3Q9P2N6 904 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 NAALADL1Q9UQQ1 740 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TDRKHQ9Y2W6 561 aaKnown RBP14.45□□□□□ -0.1
PABPC1-208ENST00000519004 TMED5Q9Y3A6 229 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 ZNF711Q9Y462 761 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 CASZ1Q86V15 1759 aa14.45□□□□□ -0.1
PABPC1-208ENST00000519004 NCANO14594 1321 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 M0R2N6 131 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 EPS15P42566 896 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 GALCP54803 685 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 FKBP3Q00688 224 aaKnown RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 TBL3Q12788 808 aaKnown RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 CTTNQ14247 550 aaKnown RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 TMEM266Q2M3C6 531 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 PLEKHG4Q58EX7 1191 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms