RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 USP54Q70EL1 1684 aa6.1□□□□□ -1.43
HDAC2-204ENST00000518756 ARHGAP23Q9P227 1491 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 CRB1P82279 1406 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MAP3K5Q99683 1374 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 IBTKQ9P2D0 1353 aaPredicted RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MAP3K19Q56UN5 1328 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 ESYT3A0FGR9 886 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 FSD2A1L4K1 749 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 PPP1R12AO14974 1030 aaPredicted RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 OPA1O60313 960 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MARCH6O60337 910 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 DNAJC8O75937 253 aaPredicted RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 ASMTLO95671 621 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MMEP08473 750 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 UBTFL1P0CB47 393 aaPredicted RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MC4RP32245 332 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 CSF2RBP32927 897 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 FLT3P36888 993 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MECP2P51608 486 aaKnown RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 ATP8B2P98198 1209 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 IRF9Q00978 393 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 CCDC173Q0VFZ6 552 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 R3HDM1Q15032 1099 aaKnown RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 MTHFSDQ2M296 383 aaKnown RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 WDR72Q3MJ13 1102 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 AMOTQ4VCS5 1084 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 CLEC17AQ6ZS10 378 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 HOMER1Q86YM7 354 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 WDR48Q8TAF3 677 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 RUFY2Q8WXA3 655 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 ASB15Q8WXK1 588 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 WNK4Q96J92 1243 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 RNPC3Q96LT9 517 aaKnown RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 LRRC37BQ96QE4 947 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 SEMA4AQ9H3S1 761 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 ASB1Q9Y576 335 aa6.09□□□□□ -1.43
HDAC2-204ENST00000518756 TNPO3Q9Y5L0 923 aaKnown RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 DDX49Q9Y6V7 483 aaKnown RBP6.09□□□□□ -1.43
HDAC2-204ENST00000518756 ADGRL3Q9HAR2 1447 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 N4BP2Q86UW6 1770 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 M0R2C6 588 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 GLRX3O76003 335 aaKnown RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 CNOT4O95628 575 aaKnown RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 MPIG6BO95866 241 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 MBD3O95983 291 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 ZBTB48P10074 688 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 GSPT1P15170 499 aaKnown RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 SDSP20132 328 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 MX1P20591 662 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 DDIT3P35638 169 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 ECE1P42892 770 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 IL13RA1P78552 427 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 KLF10Q13118 480 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 TOP3AQ13472 1001 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 USP10Q14694 798 aaKnown RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 TMEM132BQ14DG7 1078 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 STILQ15468 1287 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 TCEA2Q15560 299 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 KLHL40Q2TBA0 621 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 PLEKHO1Q53GL0 409 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 CRB2Q5IJ48 1285 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 FSTL4Q6MZW2 842 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 CC2D1AQ6P1N0 951 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 UBE2R2Q712K3 238 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 ERC1Q8IUD2 1116 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 CNTROBQ8N137 903 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 CHST14Q8NCH0 376 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 HIPK4Q8NE63 616 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 Q8TCH9 128 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 LMF1Q96S06 567 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 CABP5Q9NP86 173 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 UCKL1Q9NWZ5 548 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 MAGEC2Q9UBF1 373 aaPredicted RBP6.08□□□□□ -1.44
HDAC2-204ENST00000518756 SLC4A7Q9Y6M7 1214 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 PEAK1Q9H792 1746 aa6.08□□□□□ -1.44
HDAC2-204ENST00000518756 HIP1O00291 1037 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 BAG4O95429 457 aaKnown RBP6.07□□□□□ -1.44
HDAC2-204ENST00000518756 DDX58O95786 925 aaKnown RBP6.07□□□□□ -1.44
HDAC2-204ENST00000518756 HOXC9P31274 260 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 ETV4P43268 484 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 PDE1AP54750 535 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 TEFQ10587 303 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 PABPC4Q13310 644 aaKnown RBP eCLIP6.07□□□□□ -1.44
HDAC2-204ENST00000518756 ZNF568Q3ZCX4 644 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 C1orf141Q5JVX7 400 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
HDAC2-204ENST00000518756 RILPL2Q969X0 211 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 KIF1BPQ96EK5 621 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 MEIS3Q99687 375 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 AMNQ9BXJ7 453 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 PCED1AQ9H1Q7 454 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 OR10A5Q9H207 317 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 SEC61A2Q9H9S3 476 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 INTS7Q9NVH2 962 aaKnown RBP6.07□□□□□ -1.44
HDAC2-204ENST00000518756 ATP6V1DQ9Y5K8 247 aa6.07□□□□□ -1.44
HDAC2-204ENST00000518756 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
HDAC2-204ENST00000518756 ATP10DQ9P241 1426 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms